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BaseInfo

ncRNA ID	novel_zma_miR8666
Species	Zea mays
Class	miRNA
Genome position	Chr2:35187996-35188222 [-]
Reference genome	RefGen_v4
Source	SRR1997865
Length	24
Mature sequence(if miRNA)	1 - AUGAUAUCAUGACACGUAGACAAG - 24
Stem-loop(if miRNA)	--    C                     AC               U  U    UG   G      GU     GA AUA       G            A     CA      CA   UGUC ACGUGUUAUGAUAUCAUAUGU  AGGCUGUGAUAAAAA UU AGAA  UUU GAGAAA  UGUGA  C   AUGUGUA AAAUCUAAGAGA CUACA  UGAAAU  U   |||| |||||||||||||||||||||  ||||||||||||||| || ||||  ||| ||||||  |||||  |   ||||||| |||||||||||| |||||  ||||||   ACAG UGCACAGUACUAUAGUAUACA  UCCGACACUAUUUUU AA UUUU  AAA CUCUUU  AUACU  G   UACACAU UUUGGAUUCUCU GGUGU  ACUUUG  A GA    A                     AU               U  C    UA   G      UG     GC CGA       G            A     -A      AG
Stem-loop sequence	UGUCCACGUGUUAUGAUAUCAUAUGUACAGGCUGUGAUAAAAAUUUUAGAAUGUUUGGAGAAAGUUGUGAGACAUAAUGUGUAGAAAUCUAAGAGAACUACACAUGAAAUCAUAGAGUUUCAAUGUGGAUCUCUUAGGUUUGUACACAUAGCGCGUCAUAGUUUUCUCGAAAAUUUUUCAAUUUUUUAUCACAGCCUUAACAUAUGAUAUCAUGACACGUAGACAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI403220.1	ncRNA:24   GAACAGAUGCACAGUACUAUAGUA   1   ||||||*||||||||||||||||| targets:7   CUUGUCCACGUGUCAUGAUAUCAU   30 Target Full Sequence	1.0	Sequence 1345 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235350.1	ncRNA:24   GAACAGAUGCACAGUACUAUAGUA   1   ||||||*||||||||||||||||| targets:7   CUUGUCCACGUGUCAUGAUAUCAU   30 Target Full Sequence	1.0	Sequence 1345 from Patent EP2985353	NA	coding protein	psRNATarget
JB163681.1	ncRNA:24   GAACAGAUGCACAGUACUAUAGUA   1   ||||||*||||||||||||||||| targets:7   CUUGUCCACGUGUCAUGAUAUCAU   30 Target Full Sequence	1.0	Sequence 1345 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235339.1	ncRNA:24   GAACAGAUGCACAGUACUAUAGUA   1   =|||||*||||||||||||||||| targets:7   UUUGUCCACGUGUCAUGAUAUCAU   30 Target Full Sequence	1.0	Sequence 1334 from Patent EP2985353	NA	coding protein	psRNATarget
JB163670.1	ncRNA:24   GAACAGAUGCACAGUACUAUAGUA   1   =|||||*||||||||||||||||| targets:7   UUUGUCCACGUGUCAUGAUAUCAU   30 Target Full Sequence	1.0	Sequence 1334 from Patent EP2559767	NA	coding protein	psRNATarget
HI403209.1	ncRNA:24   GAACAGAUGCACAGUACUAUAGUA   1   =|||||*||||||||||||||||| targets:7   UUUGUCCACGUGUCAUGAUAUCAU   30 Target Full Sequence	1.0	Sequence 1334 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235352.1	ncRNA:24   GAACAGAUGCACAGUACUAUAGUA   1   |||*||*||||||||||||||||| targets:7   CUUCUCCACGUGUCAUGAUAUCAU   30 Target Full Sequence	1.0	Sequence 1347 from Patent EP2985353	NA	coding protein	psRNATarget
JB163683.1	ncRNA:24   GAACAGAUGCACAGUACUAUAGUA   1   |||*||*||||||||||||||||| targets:7   CUUCUCCACGUGUCAUGAUAUCAU   30 Target Full Sequence	1.0	Sequence 1347 from Patent EP2559767	NA	coding protein	psRNATarget
HI403222.1	ncRNA:24   GAACAGAUGCACAGUACUAUAGUA   1   |||*||*||||||||||||||||| targets:7   CUUCUCCACGUGUCAUGAUAUCAU   30 Target Full Sequence	1.0	Sequence 1347 from Patent EP2074227	NA	coding protein	psRNATarget