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BaseInfo

ncRNA ID	novel_zma_miR8653
Species	Zea mays
Class	miRNA
Genome position	Chr8:18862136-18862208 [+]
Reference genome	RefGen_v4
Source	SRR4237220
Length	24
Mature sequence(if miRNA)	50 - AUAGCCUAUGGCGCCGAGCUGUGA - 73
Stem-loop(if miRNA)	--AAU                            G A      GCUCGGCGCCAUAGGCUGUGGCGCCGAG U A      |||||||||||||||||||||||||||| | C      CGAGCCGCGGUAUCCGAUACCGCGGCUC A A AGUGU                            G C
Stem-loop sequence	AAUGCUCGGCGCCAUAGGCUGUGGCGCCGAGGUAACACAGCUCGGCGCCAUAGCCUAUGGCGCCGAGCUGUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235066.1	ncRNA:24   AGUGUCGAGCCGCGGUAUCCGAUA   1   *||||||||||||||||||||||| targets:28   ACACAGCUCGGCGCCAUAGGCUAU   51 Target Full Sequence	0.0	Sequence 1061 from Patent EP2985353	NA	coding protein	psRNATarget
JB163397.1	ncRNA:24   AGUGUCGAGCCGCGGUAUCCGAUA   1   *||||||||||||||||||||||| targets:28   ACACAGCUCGGCGCCAUAGGCUAU   51 Target Full Sequence	0.0	Sequence 1061 from Patent EP2559767	NA	coding protein	psRNATarget
HI402936.1	ncRNA:24   AGUGUCGAGCCGCGGUAUCCGAUA   1   *||||||||||||||||||||||| targets:28   ACACAGCUCGGCGCCAUAGGCUAU   51 Target Full Sequence	0.0	Sequence 1061 from Patent EP2074227	NA	coding protein	psRNATarget
NM_001137355.1	ncRNA:24   AGUGUCGAGCCGCGGUAUCCGAUA   1   *||||||||||||||||||||||| targets:676   ACACAGCUCGGCGCCAUAGGCUAU   699 Target Full Sequence	0.0	Zea mays SAUR56-auxin-responsive SAUR family member (LOC100191931), mRNA	NA	coding protein	psRNATarget
BT034188.1	ncRNA:24   AGUGUCGAGCCGCGGUAUCCGAUA   1   *||||||||||||||||||||||| targets:676   ACACAGCUCGGCGCCAUAGGCUAU   699 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0029I19 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020541199.1	ncRNA:24   AGUGUCGAGCCGCGGUAUCCGAUA   1   *||||||||||||||||||||||| targets:38   ACACAGCUCGGCGCCAUAGGCUAU   61 Target Full Sequence	0.0	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020541199.1	ncRNA:24   AGUGUCGAGCCGCGGUAUCCGAUA   1   *|=||*|||||||||||||*|||| targets:1300   ACGCACCUCGGCGCCAUAGCCUAU   1323 Target Full Sequence	2.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020541198.1	ncRNA:24   AGUGUCGAGCCGCGGUAUCCGAUA   1   *||||||||||||||||||||||| targets:36   ACACAGCUCGGCGCCAUAGGCUAU   59 Target Full Sequence	0.0	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020541198.1	ncRNA:24   AGUGUCGAGCCGCGGUAUCCGAUA   1   *|=||*|||||||||||||*|||| targets:1298   ACGCACCUCGGCGCCAUAGCCUAU   1321 Target Full Sequence	2.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008655193.2	ncRNA:24   AGUGUCGAGCCGCGGUAUCCGAUA   1   *||||||||||||||||||||||| targets:96   ACACAGCUCGGCGCCAUAGGCUAU   119 Target Full Sequence	0.0	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008655193.2	ncRNA:24   AGUGUCGAGCCGCGGUAUCCGAUA   1   *|=||*|||||||||||||*|||| targets:1357   ACGCACCUCGGCGCCAUAGCCUAU   1380 Target Full Sequence	2.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008655192.2	ncRNA:24   AGUGUCGAGCCGCGGUAUCCGAUA   1   *||||||||||||||||||||||| targets:96   ACACAGCUCGGCGCCAUAGGCUAU   119 Target Full Sequence	0.0	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008655192.2	ncRNA:24   AGUGUCGAGCCGCGGUAUCCGAUA   1   *|=||*|||||||||||||*|||| targets:1357   ACGCACCUCGGCGCCAUAGCCUAU   1380 Target Full Sequence	2.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008666663.2	ncRNA:24   AGUGUCGAGCCGCGGUAUCCGAUA   1   *|==|*|||||||||||||*|||| targets:860   ACGUACCUCGGCGCCAUAGCCUAU   883 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC103643463), mRNA	NA	coding protein	psRNATarget
XM_020543535.1	ncRNA:24   AGUGUCGAGCCGCGGUAUCCGAUA   1   *||=**|||||||||||=|||||| targets:244   CCAUUUCUCGGCGCCAUGGGCUAU   267 Target Full Sequence	2.5	PREDICTED: Zea mays proline-rich protein HaeIII subfamily 1-like (LOC109942121), mRNA	NA	coding protein	psRNATarget