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BaseInfo

ncRNA ID osa-miRf10462-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - GAUGAUGACGUUGUCGGUGAUG - NA
Stem-loop(if miRNA)      AC        U G        G  GAA      U
UCCGA  UCGCCGAC A GUCGUCGU GC   UGCCUU G
|||||  |||||||| | |||||||| ||   |||||| G
AGGCU  AGUGGCUG U CAGUAGUA CG   GCGGAA U
     GU        U G        G  ---      A
Stem-loop sequence UCCGAACUCGCCGACUAGGUCGUCGUGGCGAAUGCCUUUGGUAAAGGCGGCGAUGAUGACGUUGUCGGUGAUGUCGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
CT837478.1
ncRNA:22   GUAGUGGCUGUUGCAGUAGUAG   1
  ||||||||||=||||||||||=
targets:1718   CAUCACCGACGACGUCAUCAUU   1739

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA204F23, full insert sequence NA coding protein psRNATarget
AK067606.1
ncRNA:22   GUAGUGGCUGUUGCAGUAGUAG   1
  ==|||||*||||=|||||||||
targets:765   UGUCACCUACAAUGUCAUCAUC   786

2.5 Oryza sativa Japonica Group cDNA clone:J013112M07, full insert sequence NA coding protein psRNATarget
XM_015765513.1
ncRNA:22   GUAGUGGCUGUUGCAGUAGUAG   1
  ==|||||*||||=|||||||||
targets:773   UGUCACCUACAAUGUCAUCAUC   794

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At1g09900 (LOC4327054), mRNA pentatricopeptide repeat-containing protein At1g09900(LOC4327054) coding protein psRNATarget