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BaseInfo

ncRNA ID	novel_zma_miR8645
Species	Zea mays
Class	miRNA
Genome position	Chr7:152346550-152346624 [+]
Reference genome	RefGen_v4
Source	SRR4237220
Length	21
Mature sequence(if miRNA)	55 - CUCAAUCCACUCUUAACCGAA - 75
Stem-loop(if miRNA)	--A    -U   A   U     -    AUG    GG       GGUU  GAG UGG UUGAG GAGA   GGAG  GAUU    ||||  ||| ||| ||||| ||||   ||||  |||A    CCAA  CUC ACC AACUC CUCU   CCUC  UUAA AAG    UU   -   U     U    -AA    UA
Stem-loop sequence	AGGUUUGAGAUGGUUUGAGGAGAAUGGGAGGGGAUUAAAUUAUCUCCAAUCUCUCUCAAUCCACUCUUAACCGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT042029.1	ncRNA:21   AAGCCAAUUCUCACCUAACUC   1   ||||||||=|||||||||||| targets:179   UUCGGUUAGGAGUGGAUUGAG   199 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0114D19 mRNA, complete cds	NA	coding protein	psRNATarget
EU942467.1	ncRNA:21   AAGCCAAUUCUCACCUAACUC   1   *|||||||=|||||||||||* targets:311   CUCGGUUAGGAGUGGAUUGAA   331 Target Full Sequence	2.5	Zea mays clone 1506212 mRNA sequence	NA	coding protein	psRNATarget
BT086288.1	ncRNA:21   AAGCCAAUUCUCACCUAACUC   1   *|||||||=|||||||||||* targets:1878   CUCGGUUAGGAGUGGAUUGAA   1898 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0145E05 mRNA, complete cds	NA	coding protein	psRNATarget
BT086167.1	ncRNA:21   AAGCCAAUUCUCACCUAACUC   1   *|||||||=|||||||||||* targets:1878   CUCGGUUAGGAGUGGAUUGAA   1898 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0124D14 mRNA, complete cds	NA	coding protein	psRNATarget
BT066634.1	ncRNA:21   AAGCCAAUUCUCACCUAACUC   1   *|||||||=|||||||||||* targets:1921   CUCGGUUAGGAGUGGAUUGAA   1941 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0041F01 mRNA, complete cds	NA	coding protein	psRNATarget
EU971308.1	ncRNA:21   AAGCCAAUUCUCACCUAACUC   1   *|||||||=|||||||||||* targets:1929   CUCGGUUAGGAGUGGAUUGAA   1949 Target Full Sequence	2.5	Zea mays clone 361878 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001151382.1	ncRNA:21   AAGCCAAUUCUCACCUAACUC   1   *|||||||=|||||||||||* targets:1929   CUCGGUUAGGAGUGGAUUGAA   1949 Target Full Sequence	2.5	Zea mays protein kinase superfamily protein (LOC100277943), mRNA	NA	coding protein	psRNATarget
XM_008678815.2	ncRNA:21   AAGCCAAUUCUCACCUAACUC   1   *|||||||=|||||||||||* targets:1970   CUCGGUUAGGAGUGGAUUGAA   1990 Target Full Sequence	2.5	PREDICTED: Zea mays protein kinase superfamily protein (LOC100277943), transcript variant X1, mRNA	NA	coding protein	psRNATarget