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BaseInfo

ncRNA ID novel_zma_miR8639
Species Zea mays
Class miRNA
Genome position Chr2:66747799-66747906 [-]
Reference genome RefGen_v4
Source SRR1997865
Length 24
Mature sequence(if miRNA) 1 - GGACAGUCCGGCGUGUGGCACCAG - 24
Stem-loop(if miRNA) -- C         --     A        GCUUCCCUC      U CCAUCUA    --     A
  G GUGUCACAC  UGGAU GUCCGGUG         CACCAG G       GAAC  UAGCC U
  | |||||||||  ||||| ||||||||         |||||| |       ||||  |||||
  C CACGGUGUG  GCCUG CAGGCCAC         GUGGUC C       CUUG  AUCGG U
GA -         CG     A        ---------      - -------    UC     G
Stem-loop sequence GCGUGUCACACUGGAUAGUCCGGUGGCUUCCCUCCACCAGUGCCAUCUAGAACUAGCCAUUGGGCUACUGUUCCCUGGUGCACCGGACAGUCCGGCGUGUGGCACCAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU943461.1
ncRNA:24   GACCACGGUGUGCGGCCUGACAGG   1
  |*|||||||||||||*||||||||
targets:1194   CCGGUGCCACACGCCAGACUGUCC   1217

1.5 Zea mays clone 1624403 mRNA sequence NA coding protein psRNATarget