Search result

BaseInfo

ncRNA ID	novel_zma_miR8610
Species	Zea mays
Class	miRNA
Genome position	Chr2:92030123-92030242 [-]
Reference genome	RefGen_v4
Source	SRR1997865
Length	24
Mature sequence(if miRNA)	97 - GUUUGGUGGACAUGUAAUUGGAGG - 120
Stem-loop(if miRNA)	--            U U                 A                      CAA   GUUUGGUGGACA G AAUUGGAGGGGAUCCAU GGGGAGUAAUUCCCUCCCUAUU   A   |||||||||||| | ||||||||||||||||| ||||||||||||||||||||||   UAAACCACCUGU C UUAAUCUCCCCUAGGUA CCCCUCAUUAGGGGAGGGAUAA   U AC            C C                 C                      AUU
Stem-loop sequence	GUUUGGUGGACAUGUAAUUGGAGGGGAUCCAUAGGGGAGUAAUUCCCUCCCUAUUCAAAUUUAAAUAGGGAGGGGAUUACUCCCCCAUGGAUCCCCUCUAAUUCCCUGUCCACCAAAUCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU942647.1	ncRNA:24   GGAGGUUAAUGUACAGGUGGUUUG   1   *||=|||||*|||||||||||||| targets:526   ACUUCAAUUUCAUGUCCACCAAAC   549 Target Full Sequence	1.0	Zea mays clone 1526747 mRNA sequence	NA	coding protein	psRNATarget
LQ235127.1	ncRNA:24   GGAGGUUAAUGUACAGGUGGUUUG   1   |||||||||*|||||*|||||||| targets:103   CCUCCAAUUCCAUGUGCACCAAAC   126 Target Full Sequence	2.5	Sequence 1122 from Patent EP2985353	NA	coding protein	psRNATarget
JB163458.1	ncRNA:24   GGAGGUUAAUGUACAGGUGGUUUG   1   |||||||||*|||||*|||||||| targets:103   CCUCCAAUUCCAUGUGCACCAAAC   126 Target Full Sequence	2.5	Sequence 1122 from Patent EP2559767	NA	coding protein	psRNATarget
HI402997.1	ncRNA:24   GGAGGUUAAUGUACAGGUGGUUUG   1   |||||||||*|||||*|||||||| targets:103   CCUCCAAUUCCAUGUGCACCAAAC   126 Target Full Sequence	2.5	Sequence 1122 from Patent EP2074227	NA	coding protein	psRNATarget