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BaseInfo

ncRNA ID novel_zma_miR8608
Species Zea mays
Class miRNA
Genome position Chr6:162291511-162291560 [-]
Reference genome RefGen_v4
Source SRR4237220
Length 24
Mature sequence(if miRNA) 1 - AGCCUCACCGAGCCUGAUCGAGCC - 24
Stem-loop(if miRNA) --    U         -C   C   
  CUCG UUAGGCUCG  GAG CUCA
  |||| |||||||||  ||| |||C
  GAGC AGUCCGAGC  CUC GAGC
CC    U         CA   C   
Stem-loop sequence CUCGUUUAGGCUCGCGAGCCUCACCGAGCCUCACCGAGCCUGAUCGAGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020550142.1
ncRNA:24   CCGAGCUAGUCCGAGCCACUCCGA   1
  *||-|||*|*||||||||||||||
targets:1985   AGC-CGAGCUGGCUCGGUGAGGCU   2007

2.0 PREDICTED: Zea mays zinc finger BED domain-containing protein RICESLEEPER 2-like (LOC103649890), transcript variant X2, mRNA NA coding protein psRNATarget