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BaseInfo

ncRNA ID	novel_zma_miR8605
Species	Zea mays
Class	miRNA
Genome position	Chr5:177947538-177947584 [+]
Reference genome	RefGen_v4
Source	SRR4237220
Length	21
Mature sequence(if miRNA)	27 - UUUACCGAGAGCAGGACACUC - 47
Stem-loop(if miRNA)	--AA       G         GA     GUCUUGC CUCGGUAAA  G     ||||||| |||||||||  C     CAGGACG GAGCCAUUU  U CUCA       A         GU
Stem-loop sequence	AAGUCUUGCGCUCGGUAAAGAGCUUGUUUACCGAGAGCAGGACACUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU952231.1	ncRNA:21   CUCACAGGACGAGAGCCAUUU   1   |||||||||*||||||||||| targets:1646   GAGUGUCCUACUCUCGGUAAA   1666 Target Full Sequence	1.5	Zea mays clone 1234152 mRNA sequence	NA	coding protein	psRNATarget
HI407241.1	ncRNA:21   CUCACAGGACGAGAGCCAUUU   1   |||*||||||||||=|||||| targets:9   GAGAGUCCUGCUCUUGGUAAA   29 Target Full Sequence	2.5	Sequence 5366 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239371.1	ncRNA:21   CUCACAGGACGAGAGCCAUUU   1   |||*||||||||||=|||||| targets:9   GAGAGUCCUGCUCUUGGUAAA   29 Target Full Sequence	2.5	Sequence 5366 from Patent EP2985353	NA	coding protein	psRNATarget
JB167702.1	ncRNA:21   CUCACAGGACGAGAGCCAUUU   1   |||*||||||||||=|||||| targets:9   GAGAGUCCUGCUCUUGGUAAA   29 Target Full Sequence	2.5	Sequence 5366 from Patent EP2559767	NA	coding protein	psRNATarget
XM_008671736.2	ncRNA:21   CUCACAGGACGAGAGCCAUUU   1   |||*|||||*||||||||||| targets:211   GAGAGUCCUACUCUCGGUAAA   231 Target Full Sequence	2.5	PREDICTED: Zea mays probable serine/threonine-protein kinase PBL28 (LOC103647166), mRNA	NA	coding protein	psRNATarget