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BaseInfo

ncRNA ID osa-miRf10457-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - UGUCCCAUCCUUGUCUAGGUUUU - NA
Stem-loop(if miRNA)        U    GUCA         C                 A     CCU   C
UCUAAAA AAAA    ACCUAGACA GGAUGGGACACUUUAUA UACAA   AGU C
||||||| ||||    ||||||||| ||||||||||||||||| |||||   |||
AGGUUUU UUUU    UGGAUCUGU CCUACCCUGUGAAGUAU AUGUU   UUA A
       U    ----         U                 C     -AU   G
Stem-loop sequence UCUAAAAUAAAAGUCAACCUAGACACGGAUGGGACACUUUAUAAUACAACCUAGUCCAGAUUUAUUGUACUAUGAAGUGUCCCAUCCUUGUCUAGGUUUUUUUUUUGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK241222.1
ncRNA:23   UUUUGGAUCUGUUCCUACCCUGU   1
  |==||||||=|=|||||||||||
targets:2306   AGGACCUAGGCGAGGAUGGGACA   2328

2.5 Oryza sativa Japonica Group cDNA, clone: J065124A13, full insert sequence NA coding protein psRNATarget
XM_015791974.1
ncRNA:23   UUUUGGAUCUGUUCCUACCCUGU   1
  |==||||||=|=|||||||||||
targets:2300   AGGACCUAGGCGAGGAUGGGACA   2322

2.5 PREDICTED: Oryza sativa Japonica Group microtubule-associated protein SPIRAL2-like (LOC4343400), transcript variant X1, mRNA microtubule-associated protein SPIRAL2-like(LOC4343400) coding protein psRNATarget