ncRNA ID | osa-miRf10457-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 23 |
Mature sequence(if miRNA) | NA - UGUCCCAUCCUUGUCUAGGUUUU - NA |
Stem-loop(if miRNA) |
       U    GUCA         C                 A     CCU   C UCUAAAA AAAA    ACCUAGACA GGAUGGGACACUUUAUA UACAA   AGU C ||||||| ||||    ||||||||| ||||||||||||||||| |||||   ||| AGGUUUU UUUU    UGGAUCUGU CCUACCCUGUGAAGUAU AUGUU   UUA A        U    ----         U                 C     -AU   G |
Stem-loop sequence | UCUAAAAUAAAAGUCAACCUAGACACGGAUGGGACACUUUAUAAUACAACCUAGUCCAGAUUUAUUGUACUAUGAAGUGUCCCAUCCUUGUCUAGGUUUUUUUUUUGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK241222.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J065124A13, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015791974.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group microtubule-associated protein SPIRAL2-like (LOC4343400), transcript variant X1, mRNA | microtubule-associated protein SPIRAL2-like(LOC4343400) | coding protein | psRNATarget |