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BaseInfo

ncRNA ID novel_zma_miR8598
Species Zea mays
Class miRNA
Genome position Chr5:127669868-127669924 [+]
Reference genome RefGen_v4
Source SRR4237220;SRR4237221
Length 24
Mature sequence(if miRNA) 34 - ACGUAAAUUACUGAUCCUGGCACG - 57
Stem-loop(if miRNA) --     U   G   C         AUC
  UGCUA GAU AGU AUUUAUGUA   G
  ||||| ||| ||| |||||||||   C
  ACGGU CUA UCA UAAAUGCAU   U
GC     C   G   U         GUG
Stem-loop sequence UGCUAUGAUGAGUCAUUUAUGUAAUCGCUGUGUACGUAAAUUACUGAUCCUGGCACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT018665.1
ncRNA:24   GCACGGUCCUAGUCAUUAAAUGCA   1
  |*|**|||*||||||||||||||*
targets:797   CAUAGCAGAAUCAGUAAUUUACGG   820

2.0 Zea mays clone EL01N0510B04.d mRNA sequence NA coding protein psRNATarget
BT018023.1
ncRNA:24   GCACGGUCCUAGUCAUUAAAUGCA   1
  |*|**|||*||||||||||||||*
targets:310   CAUAGCAGAAUCAGUAAUUUACGG   333

2.0 Zea mays clone EL01N0529E03.c mRNA sequence NA coding protein psRNATarget