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BaseInfo

ncRNA ID novel_zma_miR8591
Species Zea mays
Class miRNA
Genome position Chr2:107051786-107051843 [-]
Reference genome RefGen_v4
Source SRR1997865
Length 24
Mature sequence(if miRNA) 35 - AGCACUCGGCAGAGAAGCAACACC - 58
Stem-loop(if miRNA) --                  AAC   UAG
  AGCACUCGGCAGAGAAGC   ACC   G
  ||||||||||||||||||   |||
  UCGUGAGCCGUUUCUUCG   UGG   C
UC                  AAA   CCA
Stem-loop sequence AGCACUCGGCAGAGAAGCAACACCUAGGCACCGGUAAAGCUUCUUUGCCGAGUGCUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI407027.1
ncRNA:24   CCACAACGAAGAGACGGCUCACGA   1
  |||*|||*||||=|||||||||||
targets:47   GGUCUUGGUUCUUUGCCGAGUGCU   70

2.5 Sequence 5152 from Patent EP2074227 NA coding protein psRNATarget
JB167488.1
ncRNA:24   CCACAACGAAGAGACGGCUCACGA   1
  |||*|||*||||=|||||||||||
targets:47   GGUCUUGGUUCUUUGCCGAGUGCU   70

2.5 Sequence 5152 from Patent EP2559767 NA coding protein psRNATarget
LQ239157.1
ncRNA:24   CCACAACGAAGAGACGGCUCACGA   1
  |||*|||*||||=|||||||||||
targets:47   GGUCUUGGUUCUUUGCCGAGUGCU   70

2.5 Sequence 5152 from Patent EP2985353 NA coding protein psRNATarget
LQ238769.1
ncRNA:24   CCACAACGAAGAGACGGCUCACGA   1
  *****|||||||=||||||||||*
targets:161   AAGCGUGCUUCUUUGCCGAGUGCC   184

2.5 Sequence 4764 from Patent EP2985353 NA coding protein psRNATarget
JB167100.1
ncRNA:24   CCACAACGAAGAGACGGCUCACGA   1
  *****|||||||=||||||||||*
targets:161   AAGCGUGCUUCUUUGCCGAGUGCC   184

2.5 Sequence 4764 from Patent EP2559767 NA coding protein psRNATarget
HI406639.1
ncRNA:24   CCACAACGAAGAGACGGCUCACGA   1
  *****|||||||=||||||||||*
targets:161   AAGCGUGCUUCUUUGCCGAGUGCC   184

2.5 Sequence 4764 from Patent EP2074227 NA coding protein psRNATarget