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BaseInfo

ncRNA ID novel_zma_miR8582
Species Zea mays
Class miRNA
Genome position Chr5:221556403-221556451 [-]
Reference genome RefGen_v4
Source SRR4237220;SRR4237222;SRR4237226
Length 24
Mature sequence(if miRNA) 26 - AAGAAACGGAGAAAGUACAUGCCU - 49
Stem-loop(if miRNA) --AA         AAA      -  C
    GAAACGGAG   GUACAU GC U
    |||||||||   |||||| ||
    UUUUGCUUC   UAUGUA CG A
UUUG         --A      U  G
Stem-loop sequence AAGAAACGGAGAAAGUACAUGCCUAGGCUAUGUAUACUUCGUUUUGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008651544.2
ncRNA:24   UCCGUACAUGAAAGAGGCAAAGAA   1
  |**|||*|||||*|||||||||||
targets:1348   AAACAUAUACUUCCUCCGUUUCUU   1371

2.5 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008651543.2
ncRNA:24   UCCGUACAUGAAAGAGGCAAAGAA   1
  |**|||*|||||*|||||||||||
targets:2489   AAACAUAUACUUCCUCCGUUUCUU   2512

2.5 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA NA coding protein psRNATarget