ncRNA ID | novel_zma_miR8578 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:115368382-115368437 [+] |
Reference genome | RefGen_v4 |
Source | SRR4237220 |
Length | 24 |
Mature sequence(if miRNA) | 33 - CGUUCUUGGGGAGCCUAUUGACAA - 56 |
Stem-loop(if miRNA) |
--        A   A   UC     AAU   GUCGGUGG GCU CUC  GGACG   U   |||||||| ||| |||  |||||   U   CAGUUAUC CGA GGG  CUUGC   U AA        -   G   UU     AAU |
Stem-loop sequence | GUCGGUGGAGCUACUCUCGGACGAAUUUUUAACGUUCUUGGGGAGCCUAUUGACAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ059372.1 |
|
0.0 | TSA: Zea mays contig60494, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
BT083907.2 |
|
2.0 | Zea mays full-length cDNA clone ZM_BFb0053I18 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
BT087174.2 |
|
2.0 | Zea mays full-length cDNA clone ZM_BFb0233G15 mRNA, complete cds | NA | coding protein | psRNATarget |