ncRNA ID | novel_zma_miR8571 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:58321389-58321546 [-] |
Reference genome | RefGen_v4 |
Source | SRR4237220;SRR4237221;SRR4237224;SRR4237226;SRR4237227;SRR5100255 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUCCACCCAGUUAUGGAUUGG - 21 |
Stem-loop(if miRNA) |
--      C     A      A    U  GUUCGGUUUGUUAAGACAGCAACAUACACGGUGACAAAUUUACAGGUAGC   AAUCCA AACUG GUGGAA CCCA GG                                                  U   |||||| ||||| |||||| |||| ||   UUAGGU UUGAC CACCUU GGGU UC                                                  U GG      A     C      C    A  UUUUGGGCGCCUAAGUUGAACAAUACCAUCGUCGUAAGUGUCACUGUAAU |
Stem-loop sequence | AAUCCACAACUGAGUGGAAACCCAUGGGUUCGGUUUGUUAAGACAGCAACAUACACGGUGACAAAUUUACAGGUAGCUUUAAUGUCACUGUGAAUGCUGCUACCAUAACAAGUUGAAUCCGCGGGUUUUCUAUGGGCUUCCACCCAGUUAUGGAUUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008675165.2 |
|
0.0 | PREDICTED: Zea mays Calmodulin-7 (LOC100502442), transcript variant X2, mRNA | NA | coding protein | psRNATarget |