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BaseInfo

ncRNA ID novel_zma_miR8571
Species Zea mays
Class miRNA
Genome position Chr4:58321389-58321546 [-]
Reference genome RefGen_v4
Source SRR4237220;SRR4237221;SRR4237224;SRR4237226;SRR4237227;SRR5100255
Length 21
Mature sequence(if miRNA) 1 - UUCCACCCAGUUAUGGAUUGG - 21
Stem-loop(if miRNA) --      C     A      A    U  GUUCGGUUUGUUAAGACAGCAACAUACACGGUGACAAAUUUACAGGUAGC
  AAUCCA AACUG GUGGAA CCCA GG                                                  U
  |||||| ||||| |||||| |||| ||
  UUAGGU UUGAC CACCUU GGGU UC                                                  U
GG      A     C      C    A  UUUUGGGCGCCUAAGUUGAACAAUACCAUCGUCGUAAGUGUCACUGUAAU
Stem-loop sequence AAUCCACAACUGAGUGGAAACCCAUGGGUUCGGUUUGUUAAGACAGCAACAUACACGGUGACAAAUUUACAGGUAGCUUUAAUGUCACUGUGAAUGCUGCUACCAUAACAAGUUGAAUCCGCGGGUUUUCUAUGGGCUUCCACCCAGUUAUGGAUUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008675165.2
ncRNA:21   GGUUAGGUAUUGACCCACCUU   1
  |||||||||||||||||||||
targets:919   CCAAUCCAUAACUGGGUGGAA   939

0.0 PREDICTED: Zea mays Calmodulin-7 (LOC100502442), transcript variant X2, mRNA NA coding protein psRNATarget