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BaseInfo

ncRNA ID novel_zma_miR8568
Species Zea mays
Class miRNA
Genome position Chr4:207674924-207675048 [-]
Reference genome RefGen_v4
Source SRR4237220
Length 24
Mature sequence(if miRNA) 1 - AUCCUGGACAACCGAACAAGCCCU - 24
Stem-loop(if miRNA) --    -         C     A  G      U    C      UGU   ----    GUU   CU
  GGCU GUUCGGUUG UCCGG AU GAGGCC GGAA UAUUCC   CUG    GAUU   UAC  A
  |||| ||||||||| ||||| || |||||| |||| ||||||   |||    ||||   |||  U
  CCGA CAAGCCAAC AGGUC UA CUUCGG UCUU AUAAGG   GAC    UUAG   AUG  U
UC    A         -     C  A      -    A      -UG   UAUU    AAU   UU
Stem-loop sequence GGCUGUUCGGUUGCUCCGGAAUGGAGGCCUGGAACUAUUCCUGUCUGGAUUGUUUACCUAUUUUGUAUAAGAUUUUAUCAGGUGGAAUAAUUCUGGCUUCAAUCCUGGACAACCGAACAAGCCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT040386.1
ncRNA:24   UCCCGAACAAGCCAACAGGUCCUA   1
  ||||||||||||||||||||||||
targets:821   AGGGCUUGUUCGGUUGUCCAGGAU   844

0.0 Zea mays full-length cDNA clone ZM_BFc0088H06 mRNA, complete cds NA coding protein psRNATarget