Search result

BaseInfo

ncRNA ID	novel_zma_miR8567
Species	Zea mays
Class	miRNA
Genome position	Chr4:211343185-211343262 [-]
Reference genome	RefGen_v4
Source	SRR4237220;SRR4237221
Length	23
Mature sequence(if miRNA)	56 - AAACACUCGACAAAGAAACUCUU - 78
Stem-loop(if miRNA)	--         A A     A               CAAA   AAACACUCG C AAGAA CUCUUUGCCGAGUGU    A   ||||||||| | ||||| |||||||||||||||   UUUGUGAGC G UUCUU GAGAAACGGCUCACA    A CU         C C     C               AAAU
Stem-loop sequence	AAACACUCGACAAAGAAACUCUUUGCCGAGUGUCAAAAAUAAAACACUCGGCAAAGAGCUUCUUCGCCGAGUGUUUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001165647.1	ncRNA:23   UUCUCAAAGAAACAGCUCACAAA   1   ||*|||||||||||||||||||| targets:81   AAAAGUUUCUUUGUCGAGUGUUU   103 Target Full Sequence	0.0	Zea mays uncharacterized LOC100304195 (LOC100304195), mRNA	NA	coding protein	psRNATarget
BT055423.1	ncRNA:23   UUCUCAAAGAAACAGCUCACAAA   1   ||*|||||||||||||||||||| targets:81   AAAAGUUUCUUUGUCGAGUGUUU   103 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0179M04 mRNA, complete cds	NA	coding protein	psRNATarget
BT054268.1	ncRNA:23   UUCUCAAAGAAACAGCUCACAAA   1   ||*|||||||||||||||||||| targets:2100   AAAAGUUUCUUUGUCGAGUGUUU   2122 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0206G23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152461.1	ncRNA:23   UUCUCAAAGAAACAGCUCACAAA   1   ||*|||||||||||||||||||| targets:2100   AAAAGUUUCUUUGUCGAGUGUUU   2122 Target Full Sequence	0.0	Zea mays uncharacterized LOC100279456 (IDP836), mRNA	NA	coding protein	psRNATarget