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BaseInfo

ncRNA ID	novel_zma_miR8562
Species	Zea mays
Class	miRNA
Genome position	Chr10:81355183-81355352 [+]
Reference genome	RefGen_v4
Source	SRR4237220
Length	24
Mature sequence(if miRNA)	147 - AUUAGUCCAUAGUAACCAAACACU - 170
Stem-loop(if miRNA)	--         -   GA                     A            U   CAC        C              A      UGUUUGGUU UUA  GACUAAUUUUUAGUCCCUCCA UUUAUUCUACUU AGU   UAAAUUGU AAAUAUGGAAACUA AAUA   ||||||||| |||  ||||||||||||||||||||| |||||||||||| |||   |||||||| |||||||||||||| |||G   ACAAACCAA GAU  CUGAUUAAAAAUCAGGGAGGU AAAUAAGAUGAA UCA   AUUUAACG UUUAUACCUUUGAU UUGA UC         U   AC                     A            U   AAU        U              A
Stem-loop sequence	UGUUUGGUUUUAGAGACUAAUUUUUAGUCCCUCCAAUUUAUUCUACUUUAGUCACUAAAUUGUCAAAUAUGGAAACUAAAAUAGAGUUAUAGUUUCCAUAUUUUGCAAUUUAUAAACUUAAGUAGAAUAAAAUGGAGGGACUAAAAAUUAGUCCAUAGUAACCAAACACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT084832.2	ncRNA:24   UCACAAACCAAUGAUACCUGAUUA   1   |||||||||||||||*|||||||| targets:501   AGUGUUUGGUUACUAGGGACUAAU   524 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0189L01 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008647123.2	ncRNA:24   UCACAAACCAAUGAUACCUGAUUA   1   |||||||||||||||*|||||||| targets:2572   AGUGUUUGGUUACUAGGGACUAAU   2595 Target Full Sequence	1.5	PREDICTED: Zea mays ribonuclease J (LOC103626744), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008647122.2	ncRNA:24   UCACAAACCAAUGAUACCUGAUUA   1   |||||||||||||||*|||||||| targets:2961   AGUGUUUGGUUACUAGGGACUAAU   2984 Target Full Sequence	1.5	PREDICTED: Zea mays ribonuclease J (LOC103626744), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008676145.2	ncRNA:24   UCACAAACCAAUGAUACCUGAUUA   1   =||||||||||*|||||||||||| targets:829   GGUGUUUGGUUUCUAUGGACUAAU   852 Target Full Sequence	1.5	PREDICTED: Zea mays 23 kDa jasmonate-induced protein-like (LOC103650571), mRNA	NA	coding protein	psRNATarget