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BaseInfo

ncRNA ID novel_zma_miR8553
Species Zea mays
Class miRNA
Genome position Chr3:96209710-96209755 [+]
Reference genome RefGen_v4
Source SRR4237220
Length 21
Mature sequence(if miRNA) 1 - AGAUUAAUAGAGCUAUUGCCC - 21
Stem-loop(if miRNA) --A   U     A C   -   CC
   GAU AAUAG G UAU UGC  C
   ||| ||||| | ||| |||
   CUG UUGUC C AUG ACG  C
CCA   -     C A   C   UG
Stem-loop sequence AGAUUAAUAGAGCUAUUGCCCCCGUGCACGUAACCCUGUUGUCACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU940875.1
ncRNA:21   CCCGUUAUCGAGAUAAUUAGA   1
  |||||||||||||=|||||||
targets:2100   GGGCAAUAGCUCUGUUAAUCU   2120

1.5 Zea mays clone 1165618 mRNA sequence NA coding protein psRNATarget