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BaseInfo

ncRNA ID novel_zma_miR8548
Species Zea mays
Class miRNA
Genome position Chr2:151886008-151886100 [-]
Reference genome RefGen_v4
Source SRR1997865
Length 24
Mature sequence(if miRNA) 70 - GGUAAUGGAGUGGAUUGAGGGGGC - 93
Stem-loop(if miRNA) ---          U               G      C         A
   GGUAAUGGAG GGAUUGAGGGGGCUA AAUCCC UACUAUUUA U
   |||||||||| ||||||||||||||| |||||| |||||||||
   CCAUUACCUC CCUAACUCCCCCGAU UUAGGG GUGAUAAGU U
UUC          C               A      A         U
Stem-loop sequence GGUAAUGGAGUGGAUUGAGGGGGCUAGAAUCCCCUACUAUUUAAUUUUGAAUAGUGAGGGAUUAUAGCCCCCUCAAUCCCCUCCAUUACCCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008654031.2
ncRNA:24   CGGGGGAGUUAGGUGAGGUAAUGG   1
  ||=||||||||||*|||||||||=
targets:1674   GCUCCCUCAAUCCCCUCCAUUACU   1697

2.5 PREDICTED: Zea mays peroxidase 2 (LOC103632211), transcript variant X1, mRNA NA coding protein psRNATarget