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BaseInfo

ncRNA ID novel_zma_miR8547
Species Zea mays
Class miRNA
Genome position Chr3:102181318-102181397 [-]
Reference genome RefGen_v4
Source SRR4237220;SRR4237221;SRR4237226;SRR4237227
Length 22
Mature sequence(if miRNA) 59 - AUUCCAAGAACAUAAGAGGCUU - 80
Stem-loop(if miRNA) ---AUUC  AG    U      C    -C  A  -U   UCA
       CA  AACA AAGAGG UUCU  CC UG  CUU   U
       ||  |||| |||||| ||||  || ||  |||
       GU  UUGU UUUUCC AAGA  GG GC  GAA   A
GAUAACC  CU    -      A    AA  A  UU   UCU
Stem-loop sequence AUUCCAAGAACAUAAGAGGCUUCUCCCAUGUCUUUCAUAUCUAAGUUCGAGGAAAGAAACCUUUUUGUUUCUGCCAAUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY110138.1
ncRNA:22   UUCGGAGAAUACAAGAACCUUA   1
  ****|||*||||||||||||||
targets:3338   NNNNCUCCUAUGUUCUUGGAAU   3359

2.0 Zea mays CL1610_1 mRNA sequence NA coding protein psRNATarget