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BaseInfo

ncRNA ID novel_zma_miR8541
Species Zea mays
Class miRNA
Genome position Chr2:156201544-156201630 [-]
Reference genome RefGen_v4
Source SRR1997865
Length 24
Mature sequence(if miRNA) 64 - AUCGGAGAGAAUUGAAGGGGUUAA - 87
Stem-loop(if miRNA) --AUC    A     GA                          A
     GGAG GAAUU  AGGGGUUAAAAUCCUCUUUUUAUUCA A
     |||| |||||  ||||||||||||||||||||||||||
     UCUC CUUAA  UUCCUAAUUUUAGGAGAGGAAUAAGU A
UUUGA    -     AC                          U
Stem-loop sequence AUCGGAGAGAAUUGAAGGGGUUAAAAUCCUCUUUUUAUUCAAAAUUGAAUAAGGAGAGGAUUUUAAUCCUUCAAAUUCCUCUAGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ054086.1
ncRNA:24   AAUU-GGGGAAGUUAAGAGAGGCUA   1
  ||||-|=|||**|||||||||||||
targets:68   UUAAACUCCUAAAAUUCUCUCCGAU   92

3.0 TSA: Zea mays contig55208, mRNA sequence NA coding protein psRNATarget