ncRNA ID | novel_zma_miR8532 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:201806122-201806172 [+] |
Reference genome | RefGen_v4 |
Source | SRR4237220;SRR4237224;SRR4237225 |
Length | 24 |
Mature sequence(if miRNA) | 28 - AGGACGUAUGUGCCCUCAGACACC - 51 |
Stem-loop(if miRNA) |
--UA      U  C  -       GU     UCUGAG GC CA GCGUCCU  G     |||||| || || |||||||     AGACUC CG GU UGCAGGA  U CCAC      C  U  A       AU |
Stem-loop sequence | UAUCUGAGUGCCCAGCGUCCUGUGUUAAGGACGUAUGUGCCCUCAGACACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020542781.1 |
|
1.5 | PREDICTED: Zea mays phytanoyl-CoA dioxygenase 2 (LOC103635236), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
BT019125.1 |
|
1.5 | Zea mays clone Contig739.F mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EU973405.1 |
|
1.5 | Zea mays clone 398173 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget |