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BaseInfo

ncRNA ID novel_zma_miR8523
Species Zea mays
Class miRNA
Genome position Chr10:39570715-39570883 [+]
Reference genome RefGen_v4
Source SRR4237220
Length 21
Mature sequence(if miRNA) 149 - UUCCACCCAGUUAUGGAUUGG - 169
Stem-loop(if miRNA) --                   AAC        A    CA      G    C          G            CAU    G   C
  AAUCCAUAAUUGGGUGGAA   CAUGGAAA CCCG  GGUUUA CUUG UAAGGCAGCA CAUACAUAGUGA   UGAA UUA C
  |||||||||||||||||||   |||||||| ||||  |||||| |||| |||||||||| ||||||||||||   |||| |||
  UUAGGUAUUGACCCACCUU   GUACCUUU GGGU  CCAAGU GAAC AUUCCGUCGU GUAUGUGUCACU   AUUU AAU U
GG                   GGA        G    AC      A    A          A            ---    A   G
Stem-loop sequence AAUCCAUAAUUGGGUGGAAAACCAUGGAAAACCCGCAGGUUUAGCUUGCUAAGGCAGCAGCAUACAUAGUGACAUUGAAGUUACCUGUAAAUUUAUCACUGUGUAUGAUGCUGCCUUAACAAGAUGAACCCAUGGGGUUUCCAUGAGGUUCCACCCAGUUAUGGAUUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008675165.2
ncRNA:21   GGUUAGGUAUUGACCCACCUU   1
  |||||||||||||||||||||
targets:919   CCAAUCCAUAACUGGGUGGAA   939

0.0 PREDICTED: Zea mays Calmodulin-7 (LOC100502442), transcript variant X2, mRNA NA coding protein psRNATarget