ncRNA ID | novel_zma_miR8523 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:39570715-39570883 [+] |
Reference genome | RefGen_v4 |
Source | SRR4237220 |
Length | 21 |
Mature sequence(if miRNA) | 149 - UUCCACCCAGUUAUGGAUUGG - 169 |
Stem-loop(if miRNA) |
--                   AAC        A    CA      G    C          G            CAU    G   C   AAUCCAUAAUUGGGUGGAA   CAUGGAAA CCCG  GGUUUA CUUG UAAGGCAGCA CAUACAUAGUGA   UGAA UUA C   |||||||||||||||||||   |||||||| ||||  |||||| |||| |||||||||| ||||||||||||   |||| |||   UUAGGUAUUGACCCACCUU   GUACCUUU GGGU  CCAAGU GAAC AUUCCGUCGU GUAUGUGUCACU   AUUU AAU U GG                   GGA        G    AC      A    A          A            ---    A   G |
Stem-loop sequence | AAUCCAUAAUUGGGUGGAAAACCAUGGAAAACCCGCAGGUUUAGCUUGCUAAGGCAGCAGCAUACAUAGUGACAUUGAAGUUACCUGUAAAUUUAUCACUGUGUAUGAUGCUGCCUUAACAAGAUGAACCCAUGGGGUUUCCAUGAGGUUCCACCCAGUUAUGGAUUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008675165.2 |
|
0.0 | PREDICTED: Zea mays Calmodulin-7 (LOC100502442), transcript variant X2, mRNA | NA | coding protein | psRNATarget |