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BaseInfo

ncRNA ID osa-miRf10449-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - AGCUGCUCGAGCUUGGCUCG - NA
Stem-loop(if miRNA) U    CU                UUCU  A    AUUCAA     GCUCGAGCUCCAAACGAGC
 GGAG  GCUCGAGCUUGGCUCG    AG CUCG      GCUCG                   C
 ||||  ||||||||||||||||    || ||||      |||||
 CCUU  CGAGCUCGAGCCGAGC    UC GAGC      GCUCG                   G
A    --                UAUU  -    ------     AAUCCCUCUCCGAGCCCGA
Stem-loop sequence UGGAGCUGCUCGAGCUUGGCUCGUUCUAGACUCGAUUCAAGCUCGGCUCGAGCUCCAAACGAGCCGAGCCCGAGCCUCUCCCUAAGCUCGCGAGCUUUAUCGAGCCGAGCUCGAGCUUCCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015783821.1
ncRNA:20   GCUC-GGUUCGAGCUCGUCGA   1
  ||||-||=|||||||||||||
targets:126   CGAGGCCGAGCUCGAGCAGCU   146

3.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107276174 (LOC107276174), mRNA uncharacterized LOC107276174(LOC107276174) coding protein psRNATarget
XM_015786149.1
ncRNA:20   GCUCGGUUCGAGCUCGUCGA   1
  |**|||=|||||||||||||
targets:177   CACGCCGAGCUCGAGCAGCU   196

3.0 PREDICTED: Oryza sativa Japonica Group inactive tetrahydrocannabinolic acid synthase (LOC4341258), mRNA inactive tetrahydrocannabinolic acid synthase(LOC4341258) coding protein psRNATarget
CT836254.1
ncRNA:20   GCUCGGUUCGAGCUCGUCGA   1
  |**|||=|||||||||||||
targets:126   CACGCCGAGCUCGAGCAGCU   145

3.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109J04, full insert sequence NA coding protein psRNATarget