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BaseInfo

ncRNA ID novel_zma_miR8518
Species Zea mays
Class miRNA
Genome position Chr2:99810700-99810756 [+]
Reference genome RefGen_v4
Source SRR4237220
Length 22
Mature sequence(if miRNA) 1 - UCGAACUCCGGCACGAGGCAUG - 22
Stem-loop(if miRNA) --   A    C   AC      -   UUU
  UCG ACUC GGC  GAGGCA UGG   U
  ||| |||| |||  |||||| |||   U
  GGU UGAG UCG  CUUCGU ACC   C
CG   C    -   GC      C   UCC
Stem-loop sequence UCGAACUCCGGCACGAGGCAUGGUUUUUCCCUCCACUGCUUCCGGCUGAGUCUGGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008654577.2
ncRNA:22   GUACGGAGCACGGCCUCAAGCU   1
  ==|*||||||||||*|||||||
targets:1162   UGUUCCUCGUGCCGCAGUUCGA   1183

2.5 PREDICTED: Zea mays galactoside 2-alpha-L-fucosyltransferase (LOC103632856), mRNA NA coding protein psRNATarget