Search result

BaseInfo

ncRNA ID	novel_zma_miR8508
Species	Zea mays
Class	miRNA
Genome position	Chr2:215488425-215488586 [-]
Reference genome	RefGen_v4
Source	SRR4237220;SRR4237221;SRR4237225
Length	24
Mature sequence(if miRNA)	1 - AAUUAAUUCCCGUCGGCCCGCACG - 24
Stem-loop(if miRNA)	GGC       A   -  GUUAGUUAAUCGCCGACGGUUGUACGCGGGCCGACAGGAGUUAGUUAAUCCCUGUCGGCUACGU    GCGGCCG CGG GA                                                                U    ||||||| ||| ||    CGCCCGG CUG CC                                                                G GCA       -   C  UUAAUUAAUUAGGGGCAGCCGGUUUCAUUCCGGCUGCUUUUAAUAAAUUAAGGGCAGCCGGUCA
Stem-loop sequence	GGCGCGGCCGACGGGAGUUAGUUAAUCGCCGACGGUUGUACGCGGGCCGACAGGAGUUAGUUAAUCCCUGUCGGCUACGUUGACUGGCCGACGGGAAUUAAAUAAUUUUCGUCGGCCUUACUUUGGCCGACGGGGAUUAAUUAAUUCCCGUCGGCCCGCACG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020550853.1	ncRNA:24   GCAC---GCCCGGCUGCCCUUAAUUAA   1   |*||---=|*||||||||||||||||| targets:67   CUUGACCUGAGCCGACGGGAAUUAAUU   93 Target Full Sequence	1.0	PREDICTED: Zea mays lysine-rich arabinogalactan protein 19-like (LOC103652054), mRNA	NA	coding protein	psRNATarget
XM_020552125.1	ncRNA:24   GCACGCCCGGCUGCCCUUAAUUAA   1   =***=***|||||||||||||||| targets:19   UACAUAUCCCGACGGGAAUUAAUU   42 Target Full Sequence	3.0	PREDICTED: Zea mays lysine-rich arabinogalactan protein 19-like (LOC109945774), mRNA	NA	coding protein	psRNATarget
XM_020542511.1	ncRNA:24   GCACGCCCGGCUGCCCUUAAUUAA   1   ****=|**|||||||||||||||| targets:259   AUCCUGACCCGACGGGAAUUAAUU   282 Target Full Sequence	3.0	PREDICTED: Zea mays serine/arginine repetitive matrix protein 1-like (LOC109941489), mRNA	NA	coding protein	psRNATarget