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BaseInfo

ncRNA ID	novel_zma_miR8474
Species	Zea mays
Class	miRNA
Genome position	Chr1:258346972-258347044 [-]
Reference genome	RefGen_v4
Source	SRR4237220;SRR4237221;SRR4237224;SRR4237225;SRR5105963
Length	24
Mature sequence(if miRNA)	1 - ACAGGCUGUGGCGCCGAGCUAAGG - 24
Stem-loop(if miRNA)	--AC               G             CUG     AGCUCGGCGCCAUAG CUGUGGCGCCGAG   U     ||||||||||||||| |||||||||||||   G     UCGAGCCGCGGUGUC GACACCGCGGCUC   U GGAA               G             CAU
Stem-loop sequence	ACAGCUCGGCGCCAUAGGCUGUGGCGCCGAGCUGUGUUACCUCGGCGCCACAGGCUGUGGCGCCGAGCUAAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020546116.1	ncRNA:24   GG-AAUCGAGCCGCGGUGUCGGACA   1   ||-||||||||*||||||*|||||| targets:2404   CCGUUAGCUCGCCGCCACCGCCUGU   2428 Target Full Sequence	2.5	PREDICTED: Zea mays leucine-rich repeat extensin-like protein 3 (LOC103642350), mRNA	NA	coding protein	psRNATarget
HI405915.1	ncRNA:24   GGAAUCGAGCCGCGGUGUCGGACA   1   *|**|||||||||||||||*|||| targets:55   ACGAAGCUCGGCGCCACAGGCUGU   78 Target Full Sequence	1.5	Sequence 4040 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238045.1	ncRNA:24   GGAAUCGAGCCGCGGUGUCGGACA   1   *|**|||||||||||||||*|||| targets:55   ACGAAGCUCGGCGCCACAGGCUGU   78 Target Full Sequence	1.5	Sequence 4040 from Patent EP2985353	NA	coding protein	psRNATarget
JB166376.1	ncRNA:24   GGAAUCGAGCCGCGGUGUCGGACA   1   *|**|||||||||||||||*|||| targets:55   ACGAAGCUCGGCGCCACAGGCUGU   78 Target Full Sequence	1.5	Sequence 4040 from Patent EP2559767	NA	coding protein	psRNATarget
XM_008649330.2	ncRNA:24   GGAAUCGAGCCGCGGUGUCGGACA   1   =*|||*||||||||||||||||*| targets:3   UGUUACCUCGGCGCCACAGCCUAU   26 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100273460 (LOC100273460), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008649328.2	ncRNA:24   GGAAUCGAGCCGCGGUGUCGGACA   1   =*|||*||||||||||||||||*| targets:1   UGUUACCUCGGCGCCACAGCCUAU   24 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100273460 (LOC100273460), transcript variant X1, mRNA	NA	coding protein	psRNATarget