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BaseInfo

ncRNA ID	novel_zma_miR8460
Species	Zea mays
Class	miRNA
Genome position	Chr9:32539628-32539671 [+]
Reference genome	RefGen_v4
Source	SRR4237220
Length	21
Mature sequence(if miRNA)	1 - GUGGCUGUGCGGAACUGCACA - 21
Stem-loop(if miRNA)	--       -U       U  AC   GUGGCUG  GCGGAAC GC  A   |||||||  ||||||| ||   CACCGGC  CGCUUUG CG  A AC       UC       -  AG
Stem-loop sequence	GUGGCUGUGCGGAACUGCACAAGAGCGUUUCGCCUCGGCCACCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT066557.1	ncRNA:21   ACACGUCAAGGCGUGUCGGUG   1   ||||||||||||||||||||| targets:1159   UGUGCAGUUCCGCACAGCCAC   1179 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0021B02 mRNA, complete cds	NA	coding protein	psRNATarget
LQ239208.1	ncRNA:21   ACACGUCAAGGCGUGUCGGUG   1   ***|||||*|||||||||||| targets:72   GCCGCAGUGCCGCACAGCCAC   92 Target Full Sequence	2.5	Sequence 5203 from Patent EP2985353	NA	coding protein	psRNATarget
JB167539.1	ncRNA:21   ACACGUCAAGGCGUGUCGGUG   1   ***|||||*|||||||||||| targets:72   GCCGCAGUGCCGCACAGCCAC   92 Target Full Sequence	2.5	Sequence 5203 from Patent EP2559767	NA	coding protein	psRNATarget
HI407078.1	ncRNA:21   ACACGUCAAGGCGUGUCGGUG   1   ***|||||*|||||||||||| targets:72   GCCGCAGUGCCGCACAGCCAC   92 Target Full Sequence	2.5	Sequence 5203 from Patent EP2074227	NA	coding protein	psRNATarget
DQ245612.1	ncRNA:21   ACACGUCAAGGCGUGUCGGUG   1   ***|||||*|||||||||||| targets:107   GCCGCAGUGCCGCACAGCCAC   127 Target Full Sequence	2.5	Zea mays clone 18233 mRNA sequence	NA	coding protein	psRNATarget
EU953818.1	ncRNA:21   ACACGUCAAGGCGUGUCGGUG   1   ***|||||*|||||||||||| targets:152   GCCGCAGUGCCGCACAGCCAC   172 Target Full Sequence	2.5	Zea mays clone 1446948 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU973597.1	ncRNA:21   ACACGUCAAGGCGUGUCGGUG   1   ***|||||*|||||||||||| targets:123   GCCGCAGUGCCGCACAGCCAC   143 Target Full Sequence	2.5	Zea mays clone 402684 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU975290.1	ncRNA:21   ACACGUCAAGGCGUGUCGGUG   1   ***|||||*|||||||||||| targets:65   GCCGCAGUGCCGCACAGCCAC   85 Target Full Sequence	2.5	Zea mays clone 486631 mRNA sequence	NA	coding protein	psRNATarget
BT036868.1	ncRNA:21   ACACGUCAAGGCGUGUCGGUG   1   **||*|||*|||||||||||| targets:208   CCUGGAGUGCCGCACAGCCAC   228 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0145H14 mRNA, complete cds	NA	coding protein	psRNATarget
KF263678.1	ncRNA:21   ACACGUCAAGGCGUGUCGGUG   1   **||*|||*|||||||||||| targets:468   CCUGGAGUGCCGCACAGCCAC   488 Target Full Sequence	2.5	Zea mays clone 28-C-1 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget