Search result

BaseInfo

ncRNA ID	osa-miRf10443-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - AGUCUACUCCCUCCGUCCCAAA - NA
Stem-loop(if miRNA)	A   ACA                      A           ---AU   UCC GCU UUU   GUCUACUCCCUCCGUCCCAAAA AAGUCCAAUUC     GUG   A ||| |||   |||||||||||||||||||||| |||||||||||     ||| CGA AGA   UAGAUGAGGGAGGUAGGGUUUU UUCGGGUUAAG     UAC   G    -   CAG                      C           AUCCC   UUA
Stem-loop sequence	GCUAUUUACAGUCUACUCCCUCCGUCCCAAAAAAAGUCCAAUUCAUGUGUCCAGAUUCAUCCCUAGAAUUGGGCUUCUUUUGGGAUGGAGGGAGUAGAUGACAGAAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288218.1	ncRNA:22   AAACCCUGCCUCCCUCAUCUGA   1   |||||||||||||||||||||* targets:548   UUUGGGACGGAGGGAGUAGACC   569 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090011H04, full insert sequence	NA	coding protein	psRNATarget
AK288787.1	ncRNA:22   AAACCCUGCCUCCCUCAUCUGA   1   |||||||=|||||||||||||* targets:1923   UUUGGGAUGGAGGGAGUAGACC   1944 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090069N24, full insert sequence	NA	coding protein	psRNATarget
XM_015768711.1	ncRNA:22   AA-ACCCUGCCUCCCUCAUCUGA   1   ||-|*|||||||||||||||||| targets:1455   UUAUAGGACGGAGGGAGUAGACU   1477 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4331223 (LOC4331223), transcript variant X2, mRNA	uncharacterized LOC4331223(LOC4331223)	coding protein	psRNATarget
XM_015768710.1	ncRNA:22   AA-ACCCUGCCUCCCUCAUCUGA   1   ||-|*|||||||||||||||||| targets:1468   UUAUAGGACGGAGGGAGUAGACU   1490 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4331223 (LOC4331223), transcript variant X1, mRNA	uncharacterized LOC4331223(LOC4331223)	coding protein	psRNATarget
AK288761.1	ncRNA:22   AA-ACCCUGCCUCCCUCAUCUGA   1   ||-||||||||||||||||*||| targets:2906   UUAUGGGACGGAGGGAGUACACU   2928 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090067C10, full insert sequence	NA	coding protein	psRNATarget
XM_015785156.1	ncRNA:22   AAACCCUGCCUCCCUCAUCUGA   1   |||*||||||||||||||*||| targets:10   UUUUGGACGGAGGGAGUACACU   31 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4338068 (LOC4338068), transcript variant X5, mRNA	uncharacterized LOC4338068(LOC4338068)	coding protein	psRNATarget
AK120794.1	ncRNA:22   AAACCCUGCCUCCCUCAUCUGA   1   *|**||||||||||||||||=| targets:1599   AUCUGGACGGAGGGAGUAGAUU   1620 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023012B12, full insert sequence	NA	coding protein	psRNATarget
XM_015778463.1	ncRNA:22   AAACCCUGCCUCCCUCAUCUGA   1   *|**||||||||||||||||=| targets:1660   AUCUGGACGGAGGGAGUAGAUU   1681 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group cis-zeatin O-glucosyltransferase 1 (LOC4336629), mRNA	cis-zeatin O-glucosyltransferase 1(LOC4336629)	coding protein	psRNATarget