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BaseInfo

ncRNA ID	novel_zma_miR8457
Species	Zea mays
Class	miRNA
Genome position	Chr9:1888504-1888599 [+]
Reference genome	RefGen_v4
Source	SRR4237220
Length	22
Mature sequence(if miRNA)	75 - UCCGAAGGGGAUUUGAGUUUCC - 96
Stem-loop(if miRNA)	-   C        A                      -  U      GA  GAA CUCAAAUC CCUUCGGGAUUGGAGGGGAUUG AG GGAAAU  A  ||| |||||||| |||||||||||||||||||||| || ||||||  CUU GAGUUUAG GGAAGCCUUAACUUCCCCUAAC UC CCUUUA  C C   U        G                      C  U      AU
Stem-loop sequence	GAACCUCAAAUCACCUUCGGGAUUGGAGGGGAUUGAGUGGAAAUGAACUAAUUUCCUCUCCAAUCCCCUUCAAUUCCGAAGGGGAUUUGAGUUUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU941872.1	ncRNA:22   CCUUUGAGUUUAGGGGAAGCCU   1   |||||||||||||||||||||= targets:40   GGAAACUCAAAUCCCCUUCGGG   61 Target Full Sequence	1.0	Zea mays clone 1471472 mRNA sequence	NA	coding protein	psRNATarget
BT084379.2	ncRNA:22   CCUUUGAGUUUAGGGGAAGC-CU   1   ||||||||||||||||||||-|| targets:208   GGAAACUCAAAUCCCCUUCGAGA   230 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0107D05 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008679616.2	ncRNA:22   CCUUUGAGUUUAGGGGAAGCCU   1   ||||*||||||||||||||||= targets:1135   GGAACCUCAAAUCCCCUUCGGG   1156 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103652675 (LOC103652675), mRNA	NA	coding protein	psRNATarget
XM_020546797.1	ncRNA:22   CCUUUGAGUUUAGGGGAAGCCU   1   ||||||||||||||||||*||= targets:5151   GGAAACUCAAAUCCCCUUGGGG   5172 Target Full Sequence	2.5	PREDICTED: Zea mays protein TIFY 11d (LOC103643602), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008666766.2	ncRNA:22   CCUUUGAGUUUAGGGGAAGCCU   1   ||||||||||||||||||*||= targets:5285   GGAAACUCAAAUCCCCUUGGGG   5306 Target Full Sequence	2.5	PREDICTED: Zea mays protein TIFY 11d (LOC103643602), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020545649.1	ncRNA:22   CCUUUGAGUUUAGGGGAAGCCU   1   *||||||||||||||||||*|| targets:660   UGAAACUCAAAUCCCCUUCAGA   681 Target Full Sequence	1.5	PREDICTED: Zea mays zinc finger BED domain-containing protein DAYSLEEPER-like (LOC109942989), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_008672733.2	ncRNA:22   CCUUUGAGUUUAGGGGAAGCCU   1   |*|||||||||||=|||||||= targets:2374   GAAAACUCAAAUCUCCUUCGGG   2395 Target Full Sequence	2.5	PREDICTED: Zea mays L-type lectin-domain containing receptor kinase IV.1 (LOC103648246), mRNA	NA	coding protein	psRNATarget