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BaseInfo

ncRNA ID novel_zma_miR8430
Species Zea mays
Class miRNA
Genome position Chr9:139046329-139046410 [-]
Reference genome RefGen_v4
Source SRR3385660;SRR4237220;SRR4237221;SRR4237222;SRR4237223;SRR4237224;SRR4237226;SRR5100248;SRR5100255;SRR5105959
Length 22
Mature sequence(if miRNA) 1 - GUUCAAUUGUUGGGUUUCAACU - 22
Stem-loop(if miRNA) --               C              UU    AUC
  UUGAAACCCAGCAAU GAACAUAUAUUUUG  GUAU   U
  ||||||||||||||| ||||||||||||||  ||||
  AACUUUGGGUUGUUA CUUGUAUAUAAGAC  CAUA   G
UC               A              UU    AUG
Stem-loop sequence UUGAAACCCAGCAAUCGAACAUAUAUUUUGUUGUAUAUCUGGUAAUACUUCAGAAUAUAUGUUCAAUUGUUGGGUUUCAACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001156399.1
ncRNA:22   UCAACUUUGGGUUGUUAACUUG   1
  =*|||||*|||||||||*||||
targets:1343   GAUUGAACCCCAACAAUCGAAC   1364

2.5 Zea mays ethylene responsive protein (LOC100283499), mRNA NA coding protein psRNATarget
EU964936.1
ncRNA:22   UCAACUUUGGGUUGUUAACUUG   1
  =*|||||*|||||||||*||||
targets:1343   GAUUGAACCCCAACAAUCGAAC   1364

2.5 Zea mays clone 282666 ethylene responsive protein mRNA, complete cds NA coding protein psRNATarget