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BaseInfo

ncRNA ID	ath-miRf10092-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - UCGACCAGGGGGUCGAGUGGUCU - NA
Stem-loop(if miRNA)	GGAUGA    -          GC      G   -U  G  G A       AGAC ACUCGACCUC  GGUCGA UGG  GA GU A G       |||| ||||||||||  |||||| |||  || || | U       UCUG UGAGCUGGGG  CCAGCU AUC  CU UA U G ---UCG    G          GA      G   UC  G  G G
Stem-loop sequence	GGAUGAAGACACUCGACCUCGCGGUCGAGUGGUGAGGUGAAGUGGUGAUGUCCUCUAGUCGACCAGGGGGUCGAGUGGUCUGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183042.1	ncRNA:23   UCUGGUGAGCUGGGGGACCAGCU   1   |||=||||||||||||||||||| targets:1568   AGAUCACUCGACCCCCUGGUCGA   1590 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:23   UCUGGUGAGCUGGGGGACCAGCU   1   |*||||||||||||||||||||| targets:87   ACACCACUCGACCCCCUGGUCGA   109 Target Full Sequence	0.0	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:23   UCUGGUGAGCUGGGGGACCAGCU   1   |*||||||||||||||||||||| targets:121   AAACCACUCGACCCCCUGGUCGA   143 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:23   UCUGGUGAGCUGGGGGACCAGCU   1   |*||||||||||||||||||||| targets:496   AAACCACUCGACCCCCUGGUCGA   518 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:23   UCUGGUGAGCUGGGGGACCAGCU   1   |*||||||||||||||||||||| targets:496   AAACCACUCGACCCCCUGGUCGA   518 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:23   UCUGGUGAGCUGGGGGACCAGCU   1   |*=|||||||||||||||||||| targets:227   ACGCCACUCGACCCCCUGGUCGA   249 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:23   UCUGGUGAGCUGGGGGACCAGCU   1   |*=|||||||||||||||||||| targets:227   ACGCCACUCGACCCCCUGGUCGA   249 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:23   UCUGGUGAGCUGGGGGACCAGCU   1   ***|=|||||||||||||||||| targets:178   CAUCUACUCGACCCCCUGGUCGA   200 Target Full Sequence	1.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:23   UCUGGUGAGCUGGGGGACCAGCU   1   ***|=|||||||||||||||||| targets:178   CAUCUACUCGACCCCCUGGUCGA   200 Target Full Sequence	1.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:23   UCUGGUGAGCUGGGGGACCAGCU   1   |||||||||||||||*||||||| targets:486   AGACCACUCGACCCCGUGGUCGA   508 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
AY231407.1	ncRNA:23   UCUGGUGAGCUGGGGGACCAGCU   1   **|||||||||||||*||||||| targets:532   UCACCACUCGACCCCAUGGUCGA   554 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:23   UCUGGUGAGCUGGGGGACCAGCU   1   ||||||||||||||||*|||||| targets:1101   AGACCACUCGACCCCCAGGUCGA   1123 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
NM_103391.1	ncRNA:23   UCUGGUGAGCUGGGGGACCAGCU   1   |*|||||||||||||*||||||| targets:1206   AAACCACUCGACCCCGUGGUCGA   1228 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
AY231407.1	ncRNA:23   UCUGGUGAGCUGGGGGACCAGCU   1   |*|==||*||||||||||||||| targets:580   ACAUUACYCGACCCCCUGGUCGA   602 Target Full Sequence	2.0	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
BT014714.1	ncRNA:23   UCUGGUGAGCUGGGGGACCAGCU   1   |*===||||*||||||||||||| targets:298   AUGUUACUCAACCCCCUGGUCGA   320 Target Full Sequence	2.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:23   UCUGGUGAGCUGGGGGACCAGCU   1   |*===||||*||||||||||||| targets:298   AUGUUACUCAACCCCCUGGUCGA   320 Target Full Sequence	2.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT025674.1	ncRNA:23   UCUGG--UGAGCUGGGGGACCAGCU   1   **|||--|||||||||||||||||| targets:303   CCACCUUACUCGACCCCCUGGUCGA   327 Target Full Sequence	2.5	Arabidopsis thaliana	NA	coding protein	psRNATarget
BT025674.1	ncRNA:23   UCUGGUGAGCUGGGGGACCAGCU   1   ***|=|||||||||||*|||||| targets:184   CAUCUACUCGACCCCCAGGUCGA   206 Target Full Sequence	2.5	Arabidopsis thaliana	NA	coding protein	psRNATarget