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BaseInfo

ncRNA ID novel_zma_miR8423
Species Zea mays
Class miRNA
Genome position Chr8:105397208-105397285 [-]
Reference genome RefGen_v4
Source SRR3385660
Length 19
Mature sequence(if miRNA) 1 - GGCUCUCAUGUGAACGACA - 19
Stem-loop(if miRNA) --   CA          AC    U  G  A   ---AA   C
  UCG  UCGCAUGAGG  CCAG GU GC CGC     GCU C
  |||  ||||||||||  |||| || || |||     |||
  AGC  AGUGUACUCU  GGUC CG CG GCG     CGA G
AC   -A          -C    -  G  A   CUCUG   C
Stem-loop sequence UCGCAUCGCAUGAGGACCCAGUGUGGCACGCAAGCUCCGCAGCGUCUCGCGAGCGGCCUGGCUCUCAUGUGAACGACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020552679.1
ncRNA:19   ACAGCAAGUGUACUCUCGG   1
  *||||||||*|||||||||
targets:199   GGUCGUUCAAAUGAGAGCC   217

2.5 PREDICTED: Zea mays fanconi-associated nuclease 1 homolog (LOC103655648), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020552678.1
ncRNA:19   ACAGCAAGUGUACUCUCGG   1
  *||||||||*|||||||||
targets:418   GGUCGUUCAAAUGAGAGCC   436

2.5 PREDICTED: Zea mays fanconi-associated nuclease 1 homolog (LOC103655648), transcript variant X1, mRNA NA coding protein psRNATarget