Search result

BaseInfo

ncRNA ID novel_zma_miR8416
Species Zea mays
Class miRNA
Genome position Chr7:469769-469827 [-]
Reference genome RefGen_v4
Source SRR3385660
Length 23
Mature sequence(if miRNA) 1 - GGCAAACUCUGCACUUUCCACCU - 23
Stem-loop(if miRNA) --       C      U       CCCAA
  GUGGAAA UGCAGA UUUGCCU     A
  ||||||| |||||| |||||||     C
  CACCUUU ACGUCU AAACGGG     C
UC       C      C       ACAAC
Stem-loop sequence GUGGAAACUGCAGAUUUUGCCUCCCAAACCCAACAGGGCAAACUCUGCACUUUCCACCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001154068.2
ncRNA:23   UCCACCUUUCACGUCUCAAACGG   1
  *||||||||*||||||*||||||
targets:1438   UGGUGGAAACUGCAGAUUUUGCC   1460

2.5 Zea mays legume lectins beta domain containing protein (LOC100281149), mRNA NA coding protein psRNATarget
EU955744.1
ncRNA:23   UCCACCUUUCACGUCUCAAACGG   1
  *||||||||*||||||*||||||
targets:1439   UGGUGGAAACUGCAGAUUUUGCC   1461

2.5 Zea mays clone 1544542 legume lectins beta domain containing protein mRNA, complete cds NA coding protein psRNATarget