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BaseInfo

ncRNA ID	novel_zma_miR8415
Species	Zea mays
Class	miRNA
Genome position	Chr7:31332788-31333013 [-]
Reference genome	RefGen_v4
Source	SRR3385660;SRR5451003
Length	24
Mature sequence(if miRNA)	203 - ACAUAGAAGACUGGUGCACAUGGU - 226
Stem-loop(if miRNA)	--    A   G C     C                                     G           C      -AUUAUU  A     AAAUA       C  C ACUACA   ACAU GAA A UGGUG ACAUGGUGCACAUAUUAAAUCGUCACCACUCAUUUUA AUUUAACGUCU UAGUUG       CA UUUAC     ACACCUU CA C      C   |||| ||| | ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||       || |||||     ||||||| || |      A   UGUA CUU U ACCAC UGUACCACGUGUAUAAUUUAGUAGUGGUGAGUAAAAU UAGAUUGUAGA AUCAAC       GU AAAUG     UGUGGGA GU G      C CG    C   G A     A                                     A           U      AAACCAU  A     AUUCA       A  U CACCAC
Stem-loop sequence	ACAUAGAAGACUGGUGCACAUGGUGCACAUAUUAAAUCGUCACCACUCAUUUUAGAUUUAACGUCUCUAGUUGAUUAUUCAAUUUACAAAUAACACCUUCCACCACUACACACCACCACGUUGAAGGGUGUACUUAGUAAAAUGUACCAAACAACUAUAGAUGUUAGAUAUAAAAUGAGUGGUGAUGAUUUAAUAUGUGCACCAUGUACACCAAUGUUCCAUGUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020552764.1	ncRNA:24   UGGUACACGUGGUCAGAAGAUACA   1   |||||||*|||||||||||||||| targets:3118   ACCAUGUACACCAGUCUUCUAUGU   3141 Target Full Sequence	1.0	PREDICTED: Zea mays probable serine/threonine-protein kinase WNK8 (LOC103654279), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008681116.2	ncRNA:24   UGGUACACGUGGUCAGAAGAUACA   1   |||||||*|||||||||||||||| targets:3296   ACCAUGUACACCAGUCUUCUAUGU   3319 Target Full Sequence	1.0	PREDICTED: Zea mays probable serine/threonine-protein kinase WNK8 (LOC103654279), transcript variant X1, mRNA	NA	coding protein	psRNATarget
LQ235128.1	ncRNA:24   UGGUACACGUGGUCAGAAGAUACA   1   |=|||||*|||||*|||||||||| targets:224   AUCAUGUACACCAAUCUUCUAUGU   247 Target Full Sequence	2.5	Sequence 1123 from Patent EP2985353	NA	coding protein	psRNATarget
JB163459.1	ncRNA:24   UGGUACACGUGGUCAGAAGAUACA   1   |=|||||*|||||*|||||||||| targets:224   AUCAUGUACACCAAUCUUCUAUGU   247 Target Full Sequence	2.5	Sequence 1123 from Patent EP2559767	NA	coding protein	psRNATarget
HI402998.1	ncRNA:24   UGGUACACGUGGUCAGAAGAUACA   1   |=|||||*|||||*|||||||||| targets:224   AUCAUGUACACCAAUCUUCUAUGU   247 Target Full Sequence	2.5	Sequence 1123 from Patent EP2074227	NA	coding protein	psRNATarget