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BaseInfo

ncRNA ID novel_zma_miR8409
Species Zea mays
Class miRNA
Genome position Chr6:129498770-129498812 [-]
Reference genome RefGen_v4
Source SRR3385660
Length 21
Mature sequence(if miRNA) 23 - AUGAGAUACUGUAGACCUCCG - 43
Stem-loop(if miRNA) --  GA          A    C
  AU  GAUACUGUAG CCUC G
  ||  |||||||||| ||||
  UG  UUAUGACGUC GGAG G
GG  AG          -    C
Stem-loop sequence AUGAGAUACUGUAGACCUCCGGCGAGGCUGCAGUAUUGAGUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020550808.1
ncRNA:21   GCCUCCAGAUGUCAUAGAGUA   1
  |||||*||||||||||||||*
targets:219   CGGAGCUCUACAGUAUCUCAC   239

2.0 PREDICTED: Zea mays uncharacterized mitochondrial protein AtMg00810-like (LOC109945030), mRNA NA coding protein psRNATarget
XM_020544640.1
ncRNA:21   GCCUCCAGAUGUCAUAGAGUA   1
  =||||*||||||||||||||*
targets:219   UGGAGCUCUACAGUAUCUCAC   239

2.0 PREDICTED: Zea mays uncharacterized mitochondrial protein AtMg00810-like (LOC109942557), mRNA NA coding protein psRNATarget