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BaseInfo

ncRNA ID novel_zma_miR8408
Species Zea mays
Class miRNA
Genome position Chr6:165376480-165376672 [-]
Reference genome RefGen_v4
Source SRR3385660
Length 20
Mature sequence(if miRNA) 1 - ACGUGUCUCGGAUUGUUGUG - 20
Stem-loop(if miRNA) --      A G   A     GGA        UAAG     ---------------GU   GAAAGAGUGUCGGUGGAAGUAGGCCUAACCUUAUUUUGUUUAGAG
  CAACAA U CGA ACAUG   GAGGAGGG    CGAGA                 CUC                                             A
  |||||| | ||| |||||   ||||||||    |||||                 |||
  GUUGUU A GCU UGUGC   UUUUUUUU    GCUUU                 CUU                                             C
GU      - G   C     AAG        -UAA     GUGUGUUGGGUUUAUAA   CAUGUGUUUGGUGUCGGAACAAAACGAUGUAGCUUGCGUAUCGGG
Stem-loop sequence CAACAAAUGCGAAACAUGGGAGAGGAGGGUAAGCGAGAGUCUCGAAAGAGUGUCGGUGGAAGUAGGCCUAACCUUAUUUUGUUUAGAGACGGGCUAUGCGUUCGAUGUAGCAAAACAAGGCUGUGGUUUGUGUACUUCAAUAUUUGGGUUGUGUGUUUCGAAUUUUUUUUUGAACGUGUCUCGGAUUGUUGUG