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BaseInfo

ncRNA ID	novel_zma_miR8406
Species	Zea mays
Class	miRNA
Genome position	Chr6:127482968-127483052 [+]
Reference genome	RefGen_v4
Source	SRR3385660
Length	19
Mature sequence(if miRNA)	1 - GGUGGCCGGUCGCGGGACG - 19
Stem-loop(if miRNA)	-- GU   -   U  C   AC      GG  AC   U   ---      G  GGC CGG CG GGG  GGGUGG  CC  GCC GGC   CUGA   |  ||| ||| || |||  ||||||  ||  ||| |||   |||C   C  CUG GCC GC CUC  CCUACC  GG  CGG CCG   GGCG UG UG   C   -  -   AA      AA  -C   -   AAG
Stem-loop sequence	GGUGGCCGGUCGCGGGACGGGUGGGGCCACGCCUGGCCUGACGCGGGAAGCCGGCCGGAACCAUCCAACUCCGCCGCGUCGUCGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU975601.1	ncRNA:19   GCAGGGCGCUGGCCGGUGG   1   |*||||*|||||||||||| targets:6   CAUCCCUCGACCGGCCACC   24 Target Full Sequence	2.5	Zea mays clone 493841 early nodulin-like protein 3 precursor, mRNA, complete cds	NA	coding protein	psRNATarget
BT085676.2	ncRNA:19   GCAGGGCGCUGGCCGGUGG   1   |*|||||||*||||||||| targets:748   CCUCCCGCGCCCGGCCACC   766 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0046I04 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001153606.1	ncRNA:19   GCAGGGCGCUGGCCGGUGG   1   |*||||*|||||||||||| targets:5   CAUCCCUCGACCGGCCACC   23 Target Full Sequence	2.5	Zea mays early nodulin-like protein 3 (LOC100280687), mRNA	NA	coding protein	psRNATarget
EU953262.1	ncRNA:19   GCAGGGCGCUGGCCGGUGG   1   |*||||*|||||||||||| targets:5   CAUCCCUCGACCGGCCACC   23 Target Full Sequence	2.5	Zea mays clone 1394572 early nodulin-like protein 3 precursor, mRNA, complete cds	NA	coding protein	psRNATarget
EU972360.1	ncRNA:19   GCAGGGCGCUGGCCGGUGG   1   |*||||*|||||||||||| targets:5   CAUCCCUCGACCGGCCACC   23 Target Full Sequence	2.5	Zea mays clone 380172 mRNA sequence	NA	coding protein	psRNATarget
XM_020542454.1	ncRNA:19   GCAGGGCGCUGGCCGGUGG   1   ||**||||||||||||||| targets:22   CGGACCGCGACCGGCCACC   40 Target Full Sequence	2.0	PREDICTED: Zea mays protein REDUCED WALL ACETYLATION 3-like (LOC109941464), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020542453.1	ncRNA:19   GCAGGGCGCUGGCCGGUGG   1   ||**||||||||||||||| targets:25   CGGACCGCGACCGGCCACC   43 Target Full Sequence	2.0	PREDICTED: Zea mays protein REDUCED WALL ACETYLATION 3-like (LOC109941464), transcript variant X1, mRNA	NA	coding protein	psRNATarget