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BaseInfo

ncRNA ID novel_zma_miR8397
Species Zea mays
Class miRNA
Genome position Chr5:16894178-16894218 [+]
Reference genome RefGen_v4
Source SRR3385660
Length 20
Mature sequence(if miRNA) 22 - UCCCUGACCACCUUCAGGCA - 41
Stem-loop(if miRNA) --  AU   C    -     U
  CC  AAG GUGG CAGGG C
  ||  ||| |||| ||||| A
  GG  UUC CACC GUCCC U
AC  AC   -    A     U
Stem-loop sequence CCAUAAGCGUGGCAGGGUCAUUCCCUGACCACCUUCAGGCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ517009.1
ncRNA:20   ACGGACUUCCACCAGUCCCU   1
  ||||||||||||||||||||
targets:4   UGCCUGAAGGUGGUCAGGGA   23

0.0 TSA: Zea mays cultivar W22 CL406Contig1.betc, mRNA sequence NA coding protein psRNATarget
XM_008659607.2
ncRNA:20   ACGGACUUCCACCAGUCCCU   1
  ||*||*=|||||||||||||
targets:1507   UGGCUCGAGGUGGUCAGGGA   1526

3.0 PREDICTED: Zea mays alpha/beta-Hydrolases superfamily protein (LOC103637402), mRNA NA coding protein psRNATarget