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BaseInfo

ncRNA ID	novel_zma_miR8396
Species	Zea mays
Class	miRNA
Genome position	Chr5:218027259-218027360 [-]
Reference genome	RefGen_v4
Source	SRR3385660
Length	21
Mature sequence(if miRNA)	1 - UCUUCUCCAAUUCACUGGUAA - 21
Stem-loop(if miRNA)	--    AG               GUAC           A           A   ACCA  GAAUUGGAGGGGAUU    GGGAGGAAUCC CUCGCUAUUUA A   ||||  |||||||||||||||    ||||||||||| |||||||||||   UGGU  CUUAACCUCUUCUAG    CUCUUCUUAGG GAGCGAUAAGU A AA    CA               GUAC           G           U
Stem-loop sequence	ACCAAGGAAUUGGAGGGGAUUGUACGGGAGGAAUCCACUCGCUAUUUAAAAUUGAAUAGCGAGGGGAUUCUUCUCCAUGGAUCUUCUCCAAUUCACUGGUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT068111.1	ncRNA:21   AAUGGUCACUUAACCUCUUCU   1   **|||||||||*||||||||| targets:239   ACACCAGUGAACUGGAGAAGA   259 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0045K02 mRNA, complete cds	NA	coding protein	psRNATarget
BT035564.1	ncRNA:21   AAUGGUCACUUAACCUCUUCU   1   **|||||||||*||||||||| targets:677   ACACCAGUGAACUGGAGAAGA   697 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0069K19 mRNA, complete cds	NA	coding protein	psRNATarget
EU953143.1	ncRNA:21   AAUGGUCACUUAACCUCUUCU   1   **|||||||||*||||||||| targets:665   ACACCAGUGAACUGGAGAAGA   685 Target Full Sequence	1.5	Zea mays clone 1386409 transcription factor PosF21 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001279664.2	ncRNA:21   AAUGGUCACUUAACCUCUUCU   1   **|||||||||*||||||||| targets:702   ACACCAGUGAACUGGAGAAGA   722 Target Full Sequence	1.5	Zea mays Transcription factor PosF21 (LOC100193330), mRNA	NA	coding protein	psRNATarget
EU964508.1	ncRNA:21   AAUGGUCACUUAACCUCUUCU   1   **|||||||||*||||||||| targets:702   ACACCAGUGAACUGGAGAAGA   722 Target Full Sequence	1.5	Zea mays clone 279382 transcription factor PosF21 mRNA, complete cds	NA	coding protein	psRNATarget
KJ728521.1	ncRNA:21   AAUGGUCACUUAACCUCUUCU   1   **||=||||||*||||||||| targets:761   ACACUAGUGAACUGGAGAAGA   781 Target Full Sequence	2.5	Zea mays clone pUT6826 bZIP transcription factor (bZIP10) mRNA, partial cds	NA	coding protein	psRNATarget
BT039404.1	ncRNA:21   AAUGGUCACUUAACCUCUUCU   1   **||=||||||*||||||||| targets:719   ACACUAGUGAACUGGAGAAGA   739 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0012D19 mRNA, complete cds	NA	coding protein	psRNATarget
EU971528.1	ncRNA:21   AAUGGUCACUUAACCUCUUCU   1   **||=||||||*||||||||| targets:903   ACACUAGUGAACUGGAGAAGA   923 Target Full Sequence	2.5	Zea mays clone 366637 transcription factor PosF21 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001158175.1	ncRNA:21   AAUGGUCACUUAACCUCUUCU   1   **||=||||||*||||||||| targets:903   ACACUAGUGAACUGGAGAAGA   923 Target Full Sequence	2.5	Zea mays transcription factor PosF21 (LOC100285282), mRNA	NA	coding protein	psRNATarget