ncRNA ID | novel_zma_miR8394 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:212841612-212841678 [+] |
Reference genome | RefGen_v4 |
Source | SRR3385660 |
Length | 22 |
Mature sequence(if miRNA) | 46 - AGGAUGCGUUUGGUUGCGGGAC - 67 |
Stem-loop(if miRNA) |
--        A     -  C   ---UU   UU      CCUGCAGC CAAAC CA CCU     ACU  GCCC   |||||||| ||||| || |||     |||  |||A   GGGCGUUG GUUUG GU GGA     UGA  CGGU CA        -     C  A   UUUAU   -U    |
Stem-loop sequence | CCUGCAGCACAAACCACCCUUUACUUUGCCCAUGGCUAGUUAUUUAGGAUGCGUUUGGUUGCGGGAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT062224.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0229D19 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
XM_020540770.1 |
|
1.5 | PREDICTED: Zea mays putative disease resistance RPP13-like protein 1 (LOC109939247), mRNA | NA | coding protein | psRNATarget |