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BaseInfo

ncRNA ID	novel_zma_miR8383
Species	Zea mays
Class	miRNA
Genome position	Chr5:170347790-170347877 [-]
Reference genome	RefGen_v4
Source	SRR3385660
Length	24
Mature sequence(if miRNA)	65 - AAACACAUAUGUGAUGUAGCGGUA - 88
Stem-loop(if miRNA)	--            G  G   C  -UAGCU   CU        G   AAACACAUAUGU AU UAG GG      ACU  UGGCCUUU C   |||||||||||| || ||| ||      |||  |||||||| U   UUUGUGUGUACA UA AUC CC      UGG  ACUGGAGA U UU            G  G   C  UAAACU   AC        G
Stem-loop sequence	AAACACAUAUGUGAUGUAGCGGUAGCUACUCUUGGCCUUUGCUUGAGAGGUCACAGGUUCAAAUCCCCUAGAUGACAUGUGUGUUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY109359.1	ncRNA:24   AUGGCGAUGUAGUGUAUACACAAA   1   |||=||||||||||||=||||||| targets:271   UACUGCUACAUCACAUGUGUGUUU   294 Target Full Sequence	1.5	Zea mays CL2022_2 mRNA sequence	NA	coding protein	psRNATarget
XM_020544729.1	ncRNA:24   AUGGCGAUGUAGUGUAUACACAAA   1   ||||*|||||*||||||||||||| targets:1941   UACCACUACACCACAUAUGUGUUU   1964 Target Full Sequence	1.0	PREDICTED: Zea mays cytochrome P450 78A5 (LOC103639048), mRNA	NA	coding protein	psRNATarget
EU950507.1	ncRNA:24   AUGGCGAUGUAGUGUAUACACAAA   1   ||||*|||||*|||||=||||||| targets:351   UACCACUACACCACAUGUGUGUUU   374 Target Full Sequence	2.5	Zea mays clone 495342 mRNA sequence	NA	coding protein	psRNATarget
BT054228.1	ncRNA:24   AUGGCGAUGUAGUGUAUACACAAA   1   ||||*|||||*|||||=||||||| targets:1058   UACCACUACACCACAUGUGUGUUU   1081 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0184O11 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152437.1	ncRNA:24   AUGGCGAUGUAGUGUAUACACAAA   1   ||||*|||||*|||||=||||||| targets:1058   UACCACUACACCACAUGUGUGUUU   1081 Target Full Sequence	2.5	Zea mays hypothetical protein (LOC100279428), mRNA	NA	coding protein	psRNATarget