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BaseInfo

ncRNA ID novel_zma_miR8372
Species Zea mays
Class miRNA
Genome position Chr4:230697637-230697690 [-]
Reference genome RefGen_v4
Source SRR3385660
Length 21
Mature sequence(if miRNA) 34 - GCCUGCAGGUCGGGGCCGGAU - 54
Stem-loop(if miRNA) --     CA G         G U  AC
  GCCUG  G UCGGGGCCG A GC  U
  |||||  | ||||||||| | ||  G
  CGGGC  C AGCCCCGGC U CG  C
GU     CA G         G -  AA
Stem-loop sequence GCCUGCAGGUCGGGGCCGGAUGCACUGCAAGCUGCGGCCCCGAGCACCGGGCUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020552801.1
ncRNA:21   UAGGCCGGGGCUGGACGUCCG   1
  *|||||=*||||||||||||*
targets:695   CUCCGGUACCGACCUGCAGGG   715

3.0 PREDICTED: Zea mays Methyl-CpG-binding domain-containing protein 8 (LOC103654458), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008681289.2
ncRNA:21   UAGGCCGGGGCUGGACGUCCG   1
  *|||||=*||||||||||||*
targets:731   CUCCGGUACCGACCUGCAGGG   751

3.0 PREDICTED: Zea mays Methyl-CpG-binding domain-containing protein 8 (LOC103654458), transcript variant X1, mRNA NA coding protein psRNATarget