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BaseInfo

ncRNA ID	osa-miRf10434-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - CCCGGUUGGUAACACCAACCG - NA
Stem-loop(if miRNA)	U  UC                         CAAAU CUUU UU  CGGUUGGUGUUACCAACCGGGACUA     A |||| ||  ||||||||||||||||||||||||| GAAA GA  GCCAACCACAAUGGUUGGCCCUGAU     G     U  GA                         UUCUA
Stem-loop sequence	CUUUUUUUCCGGUUGGUGUUACCAACCGGGACUACAAAUAGAUCUUUAGUCCCGGUUGGUAACACCAACCGAGAGUAAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK289098.1	ncRNA:21   GCCAACCACAAUGGUUGGCCC   1   ||||||||||||||||||||| targets:159   CGGUUGGUGUUACCAACCGGG   179 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:21   GCCAACCACAAUGGUUGGCCC   1   ||||||||*|||||||||||| targets:116   CGGUUGGUUUUACCAACCGGG   136 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK288796.1	ncRNA:21   GCCAACCACAAUGGUUGGCCC   1   ||||||||||||||||||||* targets:1842   CGGUUGGUGUUACCAACCGGA   1862 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence	NA	coding protein	psRNATarget
HI404518.1	ncRNA:21   GCCAACCACAAUGGUUGGCCC   1   |||||||||*||||||||||| targets:55   CGGUUGGUGCUACCAACCGGG   75 Target Full Sequence	1.5	Sequence 2643 from Patent EP2074227	NA	coding protein	psRNATarget
JB164979.1	ncRNA:21   GCCAACCACAAUGGUUGGCCC   1   |||||||||*||||||||||| targets:55   CGGUUGGUGCUACCAACCGGG   75 Target Full Sequence	1.5	Sequence 2643 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236648.1	ncRNA:21   GCCAACCACAAUGGUUGGCCC   1   |||||||||*||||||||||| targets:55   CGGUUGGUGCUACCAACCGGG   75 Target Full Sequence	1.5	Sequence 2643 from Patent EP2985353	NA	coding protein	psRNATarget
XM_015758314.1	ncRNA:21   GCCAACCACAAUGGUUGGCCC   1   |||||*||||||||||||||| targets:918   CGGUUUGUGUUACCAACCGGG   938 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278346 (LOC107278346), transcript variant X1, mRNA	uncharacterized LOC107278346(LOC107278346)	coding protein	psRNATarget
AK288377.1	ncRNA:21   GCCAACCACAAUGGUUGGCCC   1   ||||||||||||||||||*|| targets:1388   CGGUUGGUGUUACCAACCUGG   1408 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090026K06, full insert sequence	NA	coding protein	psRNATarget
AK288424.1	ncRNA:21   GCCAACCACAAUGGUUGGCCC   1   |||||*||||||||||||||| targets:2393   CGGUUAGUGUUACCAACCGGG   2413 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK288405.1	ncRNA:21   GCCAACCACAAUGGUUGGCCC   1   |*||||||||||||||||||| targets:2400   CCGUUGGUGUUACCAACCGGG   2420 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence	NA	coding protein	psRNATarget
LQ236416.1	ncRNA:21   GCCAACCACAAUGGUUGGCCC   1   ||*||||||||||||||=||| targets:6   CGAUUGGUGUUACCAACUGGG   26 Target Full Sequence	2.5	Sequence 2411 from Patent EP2985353	NA	coding protein	psRNATarget
HI404286.1	ncRNA:21   GCCAACCACAAUGGUUGGCCC   1   ||*||||||||||||||=||| targets:6   CGAUUGGUGUUACCAACUGGG   26 Target Full Sequence	2.5	Sequence 2411 from Patent EP2074227	NA	coding protein	psRNATarget
JB164747.1	ncRNA:21   GCCAACCACAAUGGUUGGCCC   1   ||*||||||||||||||=||| targets:6   CGAUUGGUGUUACCAACUGGG   26 Target Full Sequence	2.5	Sequence 2411 from Patent EP2559767	NA	coding protein	psRNATarget
XM_015755226.1	ncRNA:21   GCCAACCACAAUGGUUGGCCC   1   ||||||*|||||||||||||* targets:82   CGGUUGAUGUUACCAACCGGU   102 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278786 (LOC107278786), mRNA	uncharacterized LOC107278786(LOC107278786)	coding protein	psRNATarget
AK288624.1	ncRNA:21   GCCAACCACAAUGGUUGGCCC   1   |||||*||||||||||||*|| targets:4965   CGGUUAGUGUUACCAACCAGG   4985 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090054H14, full insert sequence	NA	coding protein	psRNATarget
XM_015755256.1	ncRNA:21   GCCAACCACAAUGGUUGGCCC   1   |****|||||||||||||||| targets:63   CAUCCGGUGUUACCAACCGGG   83 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346665 (LOC4346665), transcript variant X2, mRNA	uncharacterized LOC4346665(LOC4346665)	coding protein	psRNATarget