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BaseInfo

ncRNA ID	novel_zma_miR8367
Species	Zea mays
Class	miRNA
Genome position	Chr4:244915068-244915174 [-]
Reference genome	RefGen_v4
Source	SRR3385660
Length	22
Mature sequence(if miRNA)	1 - UCCCCUCGUGAUCCUGUCCACC - 22
Stem-loop(if miRNA)	--       A         A          U              A       A   UGGAUAG GAUCACGAG GGAUCUAUGG GGAGGAAUCCCCUU CUAUUUA U   ||||||| ||||||||| |||||||||| |||||||||||||| |||||||   ACCUGUC CUAGUGCUC CCUAGGUACC CCUCCUUAGGGGAA GAUAAGU U CC       -         C          C              C       U
Stem-loop sequence	UGGAUAGAGAUCACGAGAGGAUCUAUGGUGGAGGAAUCCCCUUACUAUUUAAUUUUGAAUAGCAAGGGGAUUCCUCCCCCAUGGAUCCCCUCGUGAUCCUGUCCACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235479.1	ncRNA:22   CCACCUG-UCCUAGUGCUCCCCU   1   *||*|||-||||||||||||||| targets:13   UGUUGACCAGGAUCACGAGGGGA   35 Target Full Sequence	3.0	Sequence 1474 from Patent EP2985353	NA	coding protein	psRNATarget
HI403349.1	ncRNA:22   CCACCUG-UCCUAGUGCUCCCCU   1   *||*|||-||||||||||||||| targets:13   UGUUGACCAGGAUCACGAGGGGA   35 Target Full Sequence	3.0	Sequence 1474 from Patent EP2074227	NA	coding protein	psRNATarget
JB163810.1	ncRNA:22   CCACCUG-UCCUAGUGCUCCCCU   1   *||*|||-||||||||||||||| targets:13   UGUUGACCAGGAUCACGAGGGGA   35 Target Full Sequence	3.0	Sequence 1474 from Patent EP2559767	NA	coding protein	psRNATarget
XM_008680276.2	ncRNA:22   CCACCUGUCCUAGUGCUCCCCU   1   **|||*||||||||*||||||| targets:1726   ACUGGCCAGGAUCAAGAGGGGA   1747 Target Full Sequence	2.5	PREDICTED: Zea mays GBF-interacting protein 1-like (LOC103653346), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_008680275.2	ncRNA:22   CCACCUGUCCUAGUGCUCCCCU   1   **|||*||||||||*||||||| targets:1575   ACUGGCCAGGAUCAAGAGGGGA   1596 Target Full Sequence	2.5	PREDICTED: Zea mays GBF-interacting protein 1-like (LOC103653346), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008680274.2	ncRNA:22   CCACCUGUCCUAGUGCUCCCCU   1   **|||*||||||||*||||||| targets:1629   ACUGGCCAGGAUCAAGAGGGGA   1650 Target Full Sequence	2.5	PREDICTED: Zea mays GBF-interacting protein 1-like (LOC103653346), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008680273.2	ncRNA:22   CCACCUGUCCUAGUGCUCCCCU   1   **|||*||||||||*||||||| targets:1671   ACUGGCCAGGAUCAAGAGGGGA   1692 Target Full Sequence	2.5	PREDICTED: Zea mays GBF-interacting protein 1-like (LOC103653346), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008680272.2	ncRNA:22   CCACCUGUCCUAGUGCUCCCCU   1   **|||*||||||||*||||||| targets:1725   ACUGGCCAGGAUCAAGAGGGGA   1746 Target Full Sequence	2.5	PREDICTED: Zea mays GBF-interacting protein 1-like (LOC103653346), transcript variant X1, mRNA	NA	coding protein	psRNATarget