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BaseInfo

ncRNA ID	novel_zma_miR8361
Species	Zea mays
Class	miRNA
Genome position	Chr3:179107760-179107865 [-]
Reference genome	RefGen_v4
Source	SRR3385660
Length	20
Mature sequence(if miRNA)	1 - CAGUGGUGCUGAACUAGGGG - 20
Stem-loop(if miRNA)	--                C          AA C    CU           AUG   CUUAGUUCAGCAUCAC GUUCAGUUUU  C UUCU  GGUAGUAAGGG   G   |||||||||||||||| ||||||||||  | ||||  |||||||||||   GGAUCAAGUCGUGGUG CGAGUCAAAA  G GAGA  UCAUCAUUUUU   G GG                A          CG U    AG           GCA
Stem-loop sequence	CUUAGUUCAGCAUCACCGUUCAGUUUUAACCUUCUCUGGUAGUAAGGGAUGGGACGUUUUUACUACUGAAGAGUGGCAAAACUGAGCAGUGGUGCUGAACUAGGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU944656.1	ncRNA:20   GGGGAUCAAGUCGUGGUGAC   1   ==|||||||=|||||||||| targets:844   UUCCUAGUUUAGCACCACUG   863 Target Full Sequence	2.5	Zea mays clone 225302 mRNA sequence	NA	coding protein	psRNATarget
EU944656.1	ncRNA:20   GGGGAUCAAGUCGUGGUGAC   1   =||||||||=|||||||||* targets:817   UCCCUAGUUUAGCACCACUC   836 Target Full Sequence	2.5	Zea mays clone 225302 mRNA sequence	NA	coding protein	psRNATarget
EU975665.1	ncRNA:20   GGGGAUCAAGUCGUGGUGAC   1   ==|||||||=|||||||||| targets:2168   UUCCUAGUUUAGCACCACUG   2187 Target Full Sequence	2.5	Zea mays clone 496098 mRNA sequence	NA	coding protein	psRNATarget
EU975665.1	ncRNA:20   GGGGAUCAAGUCGUGGUGAC   1   =||||||||=|||||||||* targets:2141   UCCCUAGUUUAGCACCACUC   2160 Target Full Sequence	2.5	Zea mays clone 496098 mRNA sequence	NA	coding protein	psRNATarget
XM_008680748.2	ncRNA:20   GGGGAUCAAGUCGUGGUGAC   1   ==|||||||=|||||||||| targets:2278   UUCCUAGUUUAGCACCACUG   2297 Target Full Sequence	2.5	PREDICTED: Zea mays ubiquitin carboxyl-terminal hydrolase 21 (LOC103653937), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008680748.2	ncRNA:20   GGGGAUCAAGUCGUGGUGAC   1   =||||||||=|||||||||* targets:2251   UCCCUAGUUUAGCACCACUC   2270 Target Full Sequence	2.5	PREDICTED: Zea mays ubiquitin carboxyl-terminal hydrolase 21 (LOC103653937), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008680747.2	ncRNA:20   GGGGAUCAAGUCGUGGUGAC   1   ==|||||||=|||||||||| targets:2370   UUCCUAGUUUAGCACCACUG   2389 Target Full Sequence	2.5	PREDICTED: Zea mays ubiquitin carboxyl-terminal hydrolase 21 (LOC103653937), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008680747.2	ncRNA:20   GGGGAUCAAGUCGUGGUGAC   1   =||||||||=|||||||||* targets:2343   UCCCUAGUUUAGCACCACUC   2362 Target Full Sequence	2.5	PREDICTED: Zea mays ubiquitin carboxyl-terminal hydrolase 21 (LOC103653937), transcript variant X1, mRNA	NA	coding protein	psRNATarget