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BaseInfo

ncRNA ID	novel_zma_miR8356
Species	Zea mays
Class	miRNA
Genome position	Chr2:200999000-200999041 [+]
Reference genome	RefGen_v4
Source	SRR3385660
Length	20
Mature sequence(if miRNA)	23 - UGCAUUCGUCCUCCAGGAUU - 42
Stem-loop(if miRNA)	--   A   - CC  C     U   UCC UGG G  UG GUGCA A   ||| ||| |  || |||||   AGG ACC C  GC UACGU G UU   -   U CU  U     C
Stem-loop sequence	UCCAUGGGCCUGCGUGCAUAGCUGCAUUCGUCCUCCAGGAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ054767.1	ncRNA:20   UUAGGACCUCCUGCUUACGU   1   |||||||||||||||||||| targets:173   AAUCCUGGAGGACGAAUGCA   192 Target Full Sequence	0.0	TSA: Zea mays contig55889, mRNA sequence	NA	coding protein	psRNATarget
BT065217.2	ncRNA:20   UUAGGACCUCCUGCUUACGU   1   |||||||||||||||||||| targets:173   AAUCCUGGAGGACGAAUGCA   192 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0041P18 mRNA, complete cds	NA	coding protein	psRNATarget
BT065093.2	ncRNA:20   UUAGGACCUCCUGCUUACGU   1   |||||||||||||||||||| targets:79   AAUCCUGGAGGACGAAUGCA   98 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0341N22 mRNA, complete cds	NA	coding protein	psRNATarget
AY108904.1	ncRNA:20   UUAGGACCUCCUGCUUACGU   1   *|||=|||||||||*||||| targets:583   CAUCUUGGAGGACGCAUGCA   602 Target Full Sequence	2.5	Zea mays PCO090377 mRNA sequence	NA	coding protein	psRNATarget
EU941942.1	ncRNA:20   UUAGGACCUCCUGCUUACGU   1   *|||=|||||||||*||||| targets:455   CAUCUUGGAGGACGCAUGCA   474 Target Full Sequence	2.5	Zea mays clone 1472839 mRNA sequence	NA	coding protein	psRNATarget
NM_001196642.1	ncRNA:20   UUAGGACCUCCUGCUUACGU   1   *|||=|||||||||*||||| targets:1172   CAUCUUGGAGGACGCAUGCA   1191 Target Full Sequence	2.5	Zea mays Cgi-62 (LOC100502164), mRNA	NA	coding protein	psRNATarget
BT087254.1	ncRNA:20   UUAGGACCUCCUGCUUACGU   1   *|||=|||||||||*||||| targets:1172   CAUCUUGGAGGACGCAUGCA   1191 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0018F08 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008645998.2	ncRNA:20   UUAGGACCUCCUGCUUACGU   1   *|||=|||||||||*||||| targets:1118   CAUCUUGGAGGACGCAUGCA   1137 Target Full Sequence	2.5	PREDICTED: Zea mays Cgi-62 (LOC100502164), transcript variant X1, mRNA	NA	coding protein	psRNATarget