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BaseInfo

ncRNA ID	novel_zma_miR8354
Species	Zea mays
Class	miRNA
Genome position	Chr2:143695275-143695347 [+]
Reference genome	RefGen_v4
Source	SRR3385660
Length	22
Mature sequence(if miRNA)	52 - UCGUCAAGUCGACGUCACCUAA - 73
Stem-loop(if miRNA)	--U       C    -G     A UUG   -GA    G    GGUGAUG UGAC  GACGA C   CCU   UCAA U    ||||||| ||||  ||||| |   |||   ||||    CCACUGC GCUG  CUGCU G   GGA   GGUU G AAU       A    AA     A -UA   ACA    C
Stem-loop sequence	UGGUGAUGCUGACGGACGAACUUGCCUGAUCAAGUGCUUGGACAAGGAUGAUCGUCAAGUCGACGUCACCUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT067946.2	ncRNA:22   AAUCCACUGCAGCUGAACUGCU   1   ||||||||||||*||||||||| targets:844   UUAGGUGACGUCCACUUGACGA   865 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0003M08 mRNA, complete cds	NA	coding protein	psRNATarget
BT062017.2	ncRNA:22   AAUCCACUGCAGCUGAACUGCU   1   ||||||||||||*||||||||| targets:256   UUAGGUGACGUCCACUUGACGA   277 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0206G17 mRNA, complete cds	NA	coding protein	psRNATarget
BT067225.2	ncRNA:22   AAUCCACUGCAGCUGAACUGCU   1   ||||||||||||*||||||||| targets:389   UUAGGUGACGUCCACUUGACGA   410 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0316D21 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020538546.1	ncRNA:22   AAUCCACUGCAGCUGAACUGCU   1   ||||||||||||*||||||||| targets:40   UUAGGUGACGUCCACUUGACGA   61 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC109939961 (LOC109939961), mRNA	NA	coding protein	psRNATarget