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BaseInfo

ncRNA ID	novel_zma_miR8353
Species	Zea mays
Class	miRNA
Genome position	Chr2:110931816-110931907 [+]
Reference genome	RefGen_v4
Source	SRR3385660
Length	20
Mature sequence(if miRNA)	1 - AAUGGUUGAAUUUCUUAAUA - 20
Stem-loop(if miRNA)	--AA    UG  UU         GAGUA     UG AGGAUGAGGAAG     UGGU  AA  UCUUAAUAU     GGAGG  A            A     ||||  ||  |||||||||     |||||  |     ACCA  UU  AGAGUUGUA     CCUCC  U            A CAAC    GU  -C         ---GA     GU GAGGAGGGGAAA
Stem-loop sequence	AAUGGUUGAAUUUCUUAAUAUGAGUAGGAGGUGAAGGAUGAGGAAGAAAAAGGGGAGGAGUUGCCUCCAGAUGUUGAGACUUUGACCACAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT054098.2	ncRNA:20   AUAAUUCUUUAAGUUGGUAA   1   |||||||||||||||||||| targets:1739   UAUUAAGAAAUUCAACCAUU   1758 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0098J11 mRNA, complete cds	NA	coding protein	psRNATarget
BT068118.2	ncRNA:20   AUAAUUCUUUAAGUUGGUAA   1   |||||||||||||||||||| targets:942   UAUUAAGAAAUUCAACCAUU   961 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0045P24 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008674805.2	ncRNA:20   AUAAUUCUUUAAGUUGGUAA   1   |||*|=|||||||||||||* targets:2649   UAUCAGGAAAUUCAACCAUG   2668 Target Full Sequence	3.0	PREDICTED: Zea mays regulator of telomere elongation helicase 1 (LOC100286037), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008674806.2	ncRNA:20   AUAAUUCUUUAAGUUGGUAA   1   |||*|=|||||||||||||* targets:2583   UAUCAGGAAAUUCAACCAUG   2602 Target Full Sequence	3.0	PREDICTED: Zea mays regulator of telomere elongation helicase 1 (LOC100286037), transcript variant X2, mRNA	NA	coding protein	psRNATarget