Search result

BaseInfo

ncRNA ID	ath-miRf10091-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - CUAGUCGACCAGGGGGUCGAGUGGU - NA
Stem-loop(if miRNA)	-          GC      G   -U  G  G A AGAC ACUCGACCUC  GGUCGA UGG  GA GU A G |||| ||||||||||  |||||| |||  || || | U UCUG UGAGCUGGGG  CCAGCU AUC  CU UA U G     G          GA      G   UC  G  G G
Stem-loop sequence	AGACACUCGACCUCGCGGUCGAGUGGUGAGGUGAAGUGGUGAUGUCCUCUAGUCGACCAGGGGGUCGAGUGGUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
DQ069808.1	ncRNA:25   UGGUGAGCUGGGGGACCAGCUGAUC   1   |||||||||||||||||||||*||| targets:89   ACCACUCGACCCCCUGGUCGAGUAG   113 Target Full Sequence	1.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:25   UGGUGAGCUGGGGGACCAGCUGAUC   1   |||||||||||||||||||||*||| targets:123   ACCACUCGACCCCCUGGUCGAGUAG   147 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:25   UGGUGAGCUGGGGGACCAGCUGAUC   1   |||||||||||||||||||||*||| targets:498   ACCACUCGACCCCCUGGUCGAGUAG   522 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:25   UGGUGAGCUGGGGGACCAGCUGAUC   1   |||||||||||||||||||||*||| targets:498   ACCACUCGACCCCCUGGUCGAGUAG   522 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:25   UGGUGAGCUGGGGGACCAGCUGAUC   1   |=|||||||||||||||||||*||| targets:1570   AUCACUCGACCCCCUGGUCGAGUAG   1594 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:25   UGGUGAGCUGGGGGACCAGCUGAUC   1   =||||||||||||||||||||*||* targets:229   GCCACUCGACCCCCUGGUCGAGUAU   253 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:25   UGGUGAGCUGGGGGACCAGCUGAUC   1   *|=||||||||||||||||||*||* targets:180   UCUACUCGACCCCCUGGUCGAGUAU   204 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:25   UGGUGAGCUGGGGGACCAGCUGAUC   1   =||||||||||||||||||||*||* targets:229   GCCACUCGACCCCCUGGUCGAGUAU   253 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:25   UGGUGAGCUGGGGGACCAGCUGAUC   1   *|=||||||||||||||||||*||* targets:180   UCUACUCGACCCCCUGGUCGAGUAU   204 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:25   UGGUGAGCUGGGGGACCAGCUGAUC   1   |==||*|||||||||||||||*||* targets:582   AUUACYCGACCCCCUGGUCGAGUAU   606 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
BT025674.1	ncRNA:25   UGG--UGAGCUGGGGGACCAGCUGAUC   1   |||--||||||||||||||||||*||* targets:305   ACCUUACUCGACCCCCUGGUCGAGUAU   331 Target Full Sequence	2.5	Arabidopsis thaliana	NA	coding protein	psRNATarget